RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.8■■□□□ 1.56
TMEM260-207ENST00000555497 SPATA22Q8NHS9 363 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 URGCPQ8TCY9 931 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 AZIN2Q96A70 460 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 CD248Q9HCU0 757 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 CHRAC1Q9NRG0 131 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 HEY2Q9UBP5 337 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 ZFP69BQ9UJL9 534 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 NYNRINQ9P2P1 1898 aaKnown RBP24.79■■□□□ 1.56
TMEM260-207ENST00000555497 KCNU1A8MYU2 1149 aa24.79■■□□□ 1.56
TMEM260-207ENST00000555497 MAFKO60675 156 aa24.79■■□□□ 1.56
TMEM260-207ENST00000555497 ATP6V1G2O95670 118 aa24.79■■□□□ 1.56
TMEM260-207ENST00000555497 ARFIP2P53365 341 aa24.79■■□□□ 1.56
TMEM260-207ENST00000555497 CLNKQ7Z7G1 428 aa24.79■■□□□ 1.56
TMEM260-207ENST00000555497 ACMSDQ8TDX5 336 aa24.79■■□□□ 1.56
TMEM260-207ENST00000555497 UTP4Q969X6 686 aaKnown RBP24.79■■□□□ 1.56
TMEM260-207ENST00000555497 HS3ST4Q9Y661 456 aa24.79■■□□□ 1.56
TMEM260-207ENST00000555497 FAM237BA0A1B0GVD1 139 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 CACNG3O60359 315 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 USP1O94782 785 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 CCNCP24863 283 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 GP5P40197 560 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 OCRLQ01968 901 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 PPP2R5DQ14738 602 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 HSF5Q4G112 596 aaPredicted RBP24.78■■□□□ 1.56
TMEM260-207ENST00000555497 ZNF449Q6P9G9 518 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 SLC7A6OSQ96CW6 309 aaPredicted RBP24.78■■□□□ 1.56
TMEM260-207ENST00000555497 TBC1D31Q96DN5 1066 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 PRR11Q96HE9 360 aaPredicted RBP24.78■■□□□ 1.56
TMEM260-207ENST00000555497 B3GALT6Q96L58 329 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 MPP6Q9NZW5 540 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 A8MUI8 341 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 PRKCGP05129 697 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 COG7P83436 770 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 VARS2Q5ST30 1063 aaKnown RBP24.78■■□□□ 1.56
TMEM260-207ENST00000555497 N4BP2L1Q5TBK1 243 aaPredicted RBP24.78■■□□□ 1.56
TMEM260-207ENST00000555497 ZCCHC23Q6ZST2 131 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 KLHDC8BQ8IXV7 354 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 DCP1BQ8IZD4 617 aaKnown RBP24.78■■□□□ 1.56
TMEM260-207ENST00000555497 GPR152Q8TDT2 470 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 SCML2Q9UQR0 700 aa24.78■■□□□ 1.56
TMEM260-207ENST00000555497 TUBP50607 506 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 PDE1BQ01064 536 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 ZNF33AQ06730 810 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 SWT1Q5T5J6 900 aaKnown RBP24.77■■□□□ 1.56
TMEM260-207ENST00000555497 TEDDM1Q5T9Z0 273 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 ATPAF2Q8N5M1 289 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 RAET1EQ8TD07 263 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 ZNF778Q96MU6 729 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 C7orf26Q96N11 449 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 CPNE1Q99829 537 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 FBXO6Q9NRD1 293 aaPredicted RBP24.77■■□□□ 1.56
TMEM260-207ENST00000555497 STK38LQ9Y2H1 464 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 PLXNA3P51805 1871 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 BIRC5O15392 142 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 TADA2AO75478 443 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 TRPA1O75762 1119 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 MT-CYBP00156 380 aaPredicted RBP24.77■■□□□ 1.56
TMEM260-207ENST00000555497 NPY2RP49146 381 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 GATMP50440 423 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 GPNMBQ14956 572 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 KYAT3Q6YP21 454 aaKnown RBP24.77■■□□□ 1.56
TMEM260-207ENST00000555497 TRIM42Q8IWZ5 723 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 NUP93Q8N1F7 819 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 ATAD1Q8NBU5 361 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 LRMDAQ9H2I8 198 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 STARD7Q9NQZ5 370 aa24.77■■□□□ 1.56
TMEM260-207ENST00000555497 E2F8A0AVK6 867 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 E9PAM4 449 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 SNNO75324 88 aaPredicted RBP24.76■■□□□ 1.55
TMEM260-207ENST00000555497 MYL2P10916 166 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 NMBRP28336 390 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 SERPINB3P29508 390 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 ABCG1P45844 678 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 HSP90AA5PQ58FG0 334 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 GRTP1Q5TC63 336 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 PIK3R6Q5UE93 754 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 ATG16L1Q676U5 607 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 STRA8Q7Z7C7 330 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 CMC1Q7Z7K0 106 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 CEP57Q86XR8 500 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 SKA1Q96BD8 255 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 ATXN7L3BQ96GX2 97 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 IL12RB2Q99665 862 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 RBBP8Q99708 897 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 TSEN34Q9BSV6 310 aaKnown RBP24.76■■□□□ 1.55
TMEM260-207ENST00000555497 CATSPERBQ9H7T0 1116 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 TXNDC16Q9P2K2 825 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 HCSTQ9UBK5 93 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 BAIAP2L1Q9UHR4 511 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 MTO1Q9Y2Z2 717 aaKnown RBP24.76■■□□□ 1.55
TMEM260-207ENST00000555497 FGF10O15520 208 aaPredicted RBP24.76■■□□□ 1.55
TMEM260-207ENST00000555497 SOAT2O75908 522 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 ATP5HO75947 161 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 FRG1Q14331 258 aaKnown RBP24.76■■□□□ 1.55
TMEM260-207ENST00000555497 FASTKD1Q53R41 847 aaKnown RBP24.76■■□□□ 1.55
TMEM260-207ENST00000555497 STXBP5Q5T5C0 1151 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 MON1AQ86VX9 555 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 DCLK2Q8N568 766 aa24.76■■□□□ 1.55
TMEM260-207ENST00000555497 CAPNS2Q96L46 248 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms