RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SESN2P58004 480 aaPredicted RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 ANKRD20A2Q5SQ80 823 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ANKRD20A1Q5TYW2 823 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ANKRD20A3Q5VUR7 823 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ANKRD22Q5VYY1 191 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 PDCD7Q8N8D1 485 aaKnown RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 SPATA22Q8NHS9 363 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 UBE2Q2Q8WVN8 375 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 C9orf72Q96LT7 481 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 FMO2Q99518 471 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ETNK1Q9HBU6 452 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 RCOR3Q9P2K3 495 aaPredicted RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 MAD1L1Q9Y6D9 718 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 MYO10Q9HD67 2058 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 NCOR1O75376 2440 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 VCANP13611 3396 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 FGF10O15520 208 aaPredicted RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 AVILO75366 819 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 CCNB1P14635 433 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ARSAP15289 507 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 NR2C2P49116 596 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 OXCT1P55809 520 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ITIH3Q06033 890 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 CYP1B1Q16678 543 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 SNX30Q5VWJ9 437 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 KLHDC10Q6PID8 442 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 CCDC13Q8IYE1 715 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 EFHBQ8N7U6 833 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 DNAAF3Q8N9W5 541 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 NKD2Q969F2 451 aaPredicted RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 SNF8Q96H20 258 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 MYADMQ96S97 322 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 USP29Q9HBJ7 922 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ZFP14Q9HCL3 533 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ABCB8Q9NUT2 735 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 MTRF1LQ9UGC7 380 aaKnown RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 FNDC3AQ9Y2H6 1198 aaKnown RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ITGAVP06756 1048 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 CSKP41240 450 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 GNA12Q03113 381 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 SLC10A7Q0GE19 358 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ZBTB17Q13105 803 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 EIF4EBP2Q13542 120 aaPredicted RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 ZNF235Q14590 738 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 TAZQ16635 292 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 DUPD1Q68J44 220 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ZNF572Q7Z3I7 529 aaPredicted RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 GPR149Q86SP6 731 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ZNF567Q8N184 647 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ZNF366Q8N895 744 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 IPMKQ8NFU5 416 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 SORCS1Q8WY21 1168 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 C1orf74Q96LT6 269 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 POMKQ9H5K3 350 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 FAM114A2Q9NRY5 505 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 SHROOM3Q8TF72 1996 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 ACSL3O95573 720 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 MT-CYBP00156 380 aaPredicted RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 IGLV3-27P01718 113 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 TPH1P17752 444 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 NFKB1P19838 968 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 GRIA1P42261 906 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 SCNN1BP51168 640 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 CRADDP78560 199 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 NNTQ13423 1086 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 ADAM15Q13444 863 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 PAFAH1B3Q15102 231 aaKnown RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 ARHGAP12Q8IWW6 846 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 SLC25A41Q8N5S1 370 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 DEFB123Q8N688 67 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 RSPRY1Q96DX4 576 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 SAYSD1Q9NPB0 183 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 GTSE1Q9NYZ3 720 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 CLEC1BQ9P126 229 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 ARHGAP26Q9UNA1 814 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 DRG1Q9Y295 367 aaKnown RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 A0A1B0GVM2 712 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 TCAF2A6NFQ2 919 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 CLDN11O75508 207 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 GJB3O75712 270 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 HOXA9P31269 272 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 PTPN7P35236 360 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 SLC7A9P82251 487 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 MAP9Q49MG5 647 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 MARC1Q5VT66 337 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 CACUL1Q86Y37 369 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 APCDD1Q8J025 514 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 HJURPQ8NCD3 748 aaPredicted RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 BPIFB1Q8TDL5 484 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 RUNDC3BQ96NL0 473 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 CDCA3Q99618 268 aaPredicted RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 NOL6Q9H6R4 1146 aaKnown RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 DZANK1Q9NVP4 752 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 TPX2Q9ULW0 747 aaKnown RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 PLXNA3P51805 1871 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 COL6A3P12111 3177 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 SPTBN5Q9NRC6 3674 aaKnown RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 K7ERQ8 282 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms