RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CEP70Q8NHQ1 597 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 ZC3H15Q8WU90 426 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 KBTBD7Q8WVZ9 684 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 TOP1MTQ969P6 601 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CNBD2Q96M20 576 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 TRIM56Q9BRZ2 755 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 OSBPL11Q9BXB4 747 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CDH19Q9H159 772 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PRDM16Q9HAZ2 1276 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 MRGBPQ9NV56 204 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 COPG2Q9UBF2 871 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 RRN3P2A6NIE6 340 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 KCNN4O15554 427 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 LYPLA1O75608 230 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 RALBP11234 206 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 ATP6V1B1P15313 513 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 NCF2P19878 526 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 GLDCP23378 1020 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 PTPN9P43378 593 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 PSMD7P51665 324 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 COG7P83436 770 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 NIPAL4Q0D2K0 466 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF423Q2M1K9 1284 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 C15orf59Q2T9L4 293 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 KLHL35Q6PF15 583 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 POTEHQ6S545 545 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 MAMDC4Q6UXC1 1216 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 NPNTQ6UXI9 565 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 PATL1Q86TB9 770 aaKnown RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 CHERPQ8IWX8 916 aaKnown RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 TAB3Q8N5C8 712 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 TSPAN14Q8NG11 270 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 ISL2Q96A47 359 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 TSPAN18Q96SJ8 248 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 FERMT1Q9BQL6 677 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 C16orf70Q9BSU1 422 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 NAT9Q9BTE0 207 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 OSBPL6Q9BZF3 934 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 MID2Q9UJV3 735 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 FAF1Q9UNN5 650 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 MGAMO43451 1857 aa10.92□□□□□ -0.66
MTHFD1-210ENST00000555252 GOLGA8QA0A0J9YX86 632 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 GOLGA8OA6NCC3 632 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 GOLGA8NF8WBI6 632 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 H3BRB1 525 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 UGT1A9O60656 530 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 CLASP2O75122 1294 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 TADA2AO75478 443 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 GCATO75600 419 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 BCAS2O75934 225 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SORBS2O94875 1100 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 BMP10O95393 424 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PORP16435 677 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PCSK6P29122 969 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 GARSP41250 739 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 NR2C2P49116 596 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 GALK1P51570 392 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PRKAA2P54646 552 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 MTA1Q13330 715 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 MTM1Q13496 603 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 GRIK4Q16099 956 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC44A4Q53GD3 710 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 TRNP1Q6NT89 227 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 C16orf46Q6P387 395 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SCYL2Q6P3W7 929 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 USP50Q70EL3 339 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 CPSF7Q8N684 471 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 HIPK4Q8NE63 616 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC35F5Q8WV83 523 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 ABTB1Q969K4 478 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF597Q96LX8 424 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 TUT1Q9H6E5 874 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 UGT1A7Q9HAW7 530 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 UGT1A10Q9HAW8 530 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 UGT1A8Q9HAW9 530 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 NGRNQ9NPE2 291 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PNPOQ9NVS9 261 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 IGSF9Q9P2J2 1179 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 APPL1Q9UKG1 709 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 ADAM28Q9UKQ2 775 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC45A1Q9Y2W3 748 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 KANSL1LA0AUZ9 987 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 UNCXA6NJT0 531 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 KPNA7A9QM74 516 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 DCXO43602 365 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 H6PDO95479 791 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 APRTP07741 180 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 HOXD8P13378 290 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 YBX3P16989 372 aaKnown RBP eCLIP10.91□□□□□ -0.662e-7■□□□□ 9.5
MTHFD1-210ENST00000555252 ME2P23368 584 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 IL4RP24394 825 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 ACADSBP45954 432 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PDE1CQ14123 709 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 CDO1Q16878 200 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PDCD4Q53EL6 469 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PPP1R26Q5T8A7 1209 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SH3PXD2AQ5TCZ1 1133 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms