RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DARS2Q6PI48 645 aaKnown RBP11.04□□□□□ -0.64
TDP1-211ENST00000555178 OTOP3Q7RTS5 596 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 GSTA5Q7RTV2 222 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 APCDD1Q8J025 514 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 CPXM2Q8N436 756 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 ALLCQ8N6M5 410 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 TTC13Q8NBP0 860 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 CATSPERBQ9H7T0 1116 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 FBRSL1Q9HCM7 1045 aaKnown RBP11.04□□□□□ -0.64
TDP1-211ENST00000555178 TMEM248Q9NWD8 314 aa11.04□□□□□ -0.64
TDP1-211ENST00000555178 INTS6Q9UL03 887 aaKnown RBP11.04□□□□□ -0.64
TDP1-211ENST00000555178 ANKRD36A6QL64 1941 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 KCNN4O15554 427 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 LATS1O95835 1130 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ITGAVP06756 1048 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 TYRP14679 529 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 RHOQP17081 205 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 PSMC3P17980 439 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 AP1B1Q10567 949 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 AFMIDQ63HM1 303 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 DRICH1Q6PGQ1 229 aaPredicted RBP11.03□□□□□ -0.64
TDP1-211ENST00000555178 SLC44A3Q8N4M1 653 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 CCNYQ8ND76 341 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ATL2Q8NHH9 583 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 CASKIN2Q8WXE0 1202 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 HMCESQ96FZ2 354 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 LMLNQ96KR4 655 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 QKIQ96PU8 341 aaKnown RBP eCLIP11.03□□□□□ -0.647e-10■■■■■ 43.3
TDP1-211ENST00000555178 BBS2Q9BXC9 721 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 PARD6BQ9BYG5 372 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 KIF9Q9HAQ2 790 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 USP29Q9HBJ7 922 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 EPB41L5Q9HCM4 733 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 F5H423 210 aaPredicted RBP11.03□□□□□ -0.64
TDP1-211ENST00000555178 J3KR12 359 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 KCNK1O00180 336 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ECI2O75521 394 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 PENKP01210 267 aaPredicted RBP11.03□□□□□ -0.64
TDP1-211ENST00000555178 HLA-FP30511 346 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 OR1E1P30953 314 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ZNF135P52742 658 aaPredicted RBP11.03□□□□□ -0.64
TDP1-211ENST00000555178 GALNT2Q10471 571 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 DHX34Q14147 1143 aaKnown RBP11.03□□□□□ -0.64
TDP1-211ENST00000555178 PPP1R7Q15435 360 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 SLC45A4Q5BKX6 768 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 TMEM215Q68D42 235 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ALG14Q96F25 216 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 CD320Q9NPF0 282 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ZDHHC4Q9NPG8 344 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 HOMER3Q9NSC5 361 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 ZMYM5Q9UJ78 669 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 SNX24Q9Y343 169 aa11.03□□□□□ -0.64
TDP1-211ENST00000555178 WASH4PA8MWX3 477 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 SNAP91O60641 907 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 BMP1P13497 986 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 HTR7P34969 479 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 CHKAP35790 457 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 CSKP41240 450 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 GARSP41250 739 aaKnown RBP11.02□□□□□ -0.65
TDP1-211ENST00000555178 RPL21P46778 160 aaKnown RBP11.02□□□□□ -0.65
TDP1-211ENST00000555178 IFNAR2P48551 515 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 NR2C2P49116 596 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 CARSP49589 748 aaKnown RBP11.02□□□□□ -0.65
TDP1-211ENST00000555178 PAPOLAP51003 745 aaKnown RBP11.02□□□□□ -0.65
TDP1-211ENST00000555178 LMAN2Q12907 356 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 PRKD1Q15139 912 aaPredicted RBP11.02□□□□□ -0.65
TDP1-211ENST00000555178 SYCP2LQ5T4T6 812 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 RNF219Q5W0B1 726 aaPredicted RBP11.02□□□□□ -0.65
TDP1-211ENST00000555178 MAATS1Q7Z4T9 603 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 TFB1MQ8WVM0 346 aaKnown RBP11.02□□□□□ -0.65
TDP1-211ENST00000555178 SLCO2A1Q92959 643 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 NEUROG2Q9H2A3 272 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 OBP2AQ9NY56 170 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 SEPT10Q9P0V9 454 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 ZNF510Q9Y2H8 683 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 OR51B4Q9Y5P0 310 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
TDP1-211ENST00000555178 A0A1B0GVM2 712 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 TCAF2A6NFQ2 919 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 SHISA7A6NL88 538 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 LOC730098B7Z3J9 87 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 RASA4BC9J798 803 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 H0Y626 953 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 RASA4O43374 803 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 LUC7L3O95232 432 aaKnown RBP11.01□□□□□ -0.65
TDP1-211ENST00000555178 KRT14P02533 472 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 SERPINB6P35237 376 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
TDP1-211ENST00000555178 CDH4P55283 916 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 GEN1Q17RS7 908 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 MPPE1Q53F39 396 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 RABGAP1LQ5R372 815 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 FAXCQ5TGI0 409 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 TXNDC11Q6PKC3 985 aa11.01□□□□□ -0.65
TDP1-211ENST00000555178 HJURPQ8NCD3 748 aaPredicted RBP11.01□□□□□ -0.65
TDP1-211ENST00000555178 SORCS1Q8WY21 1168 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms