RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SH3BP1Q9Y3L3 701 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 NRG2O14511 850 aaPredicted RBP9.11□□□□□ -0.95
TDP1-210ENST00000554976 COCHO43405 550 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 GJB5O95377 273 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 NFKB1P19838 968 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 ZNF449Q6P9G9 518 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 FOXR1Q6PIV2 292 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 WBP2Q969T9 261 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 SGSM3Q96HU1 749 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 PRICKLE1Q96MT3 831 aaPredicted RBP9.11□□□□□ -0.95
TDP1-210ENST00000554976 KLF16Q9BXK1 252 aaPredicted RBP9.11□□□□□ -0.95
TDP1-210ENST00000554976 ZYG11BQ9C0D3 744 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 IL21Q9HBE4 155 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 ATP13A1Q9HD20 1204 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 SPG21Q9NZD8 308 aa9.11□□□□□ -0.95
TDP1-210ENST00000554976 MYO18AQ92614 2054 aaKnown RBP9.11□□□□□ -0.95
TDP1-210ENST00000554976 TLR5O60602 858 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 APOEP02649 317 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 F11P03951 625 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 ATP5DP30049 168 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 PAPOLAP51003 745 aaKnown RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 NR1H3Q13133 447 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 MSLNQ13421 630 aaPredicted RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 KBTBD12Q3ZCT8 623 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 DENND5AQ6IQ26 1287 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 LILRA6Q6PI73 481 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 ATP6V0D2Q8N8Y2 350 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CCNYQ8ND76 341 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 RNF34Q969K3 372 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 FCRL5Q96RD9 977 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CDK5RAP1Q96SZ6 601 aaKnown RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 SIK2Q9H0K1 926 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 RETREG1Q9H6L5 497 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 ZNF334Q9HCZ1 680 aaPredicted RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 GRID1Q9ULK0 1009 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 GOLGA6L7A0A1B0GV03 622 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 A0A1W2PPM1 405 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 TMEM120BA0PK00 339 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 ERI2A8K979 691 aaKnown RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 HLA-DQB2P05538 268 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 MMP2P08253 660 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CSRP3P50461 194 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 KCNQ1P51787 676 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 MTA1Q13330 715 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 NUGGCQ68CJ6 796 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 TAOK1Q7L7X3 1001 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 PACS2Q86VP3 889 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 TMC8Q8IU68 726 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 LRRC49Q8IUZ0 686 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CCDC117Q8IWD4 279 aaPredicted RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 GSDMBQ8TAX9 411 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 PSMG2Q969U7 264 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 RNF38Q9H0F5 515 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 KIF9Q9HAQ2 790 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 SYBUQ9NX95 663 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 COL4A3Q01955 1670 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 PIAS1O75925 651 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 STK10O94804 968 aaKnown RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 KLKB1P03952 638 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CSH1P0DML2 217 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CSH2P0DML3 217 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CTSAP10619 480 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CCNB1P14635 433 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 STX2P32856 288 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 CCNFP41002 786 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 KPNA1P52294 538 aaPredicted RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 COG7P83436 770 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 ZXDBP98169 803 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 BTG3Q14201 252 aaPredicted RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 TMED2Q15363 201 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 C10orf120Q5SQS8 335 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 RWDD4Q6NW29 188 aaKnown RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 TRMT10BQ6PF06 316 aaKnown RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 CAPN12Q6ZSI9 719 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 FAM217AQ8IXS0 508 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 OR52K2Q8NGK3 314 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 AUTS2Q8WXX7 1259 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 PLD4Q96BZ4 506 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 FCRL3Q96P31 734 aaPredicted RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 CCDC77Q9BR77 488 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 ZC3H7BQ9UGR2 993 aaKnown RBP9.1□□□□□ -0.95
TDP1-210ENST00000554976 TBK1Q9UHD2 729 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 VANGL2Q9ULK5 521 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 INSL5Q9Y5Q6 135 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 ANKRD36A6QL64 1941 aa9.1□□□□□ -0.95
TDP1-210ENST00000554976 SLC12A8A0AV02 714 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 TEX28O15482 410 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 UGT1A9O60656 530 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 MOCS2O96007 188 aaPredicted RBP9.09□□□□□ -0.95
TDP1-210ENST00000554976 PGAM1P18669 254 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 TACR2P21452 398 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 DRD4P21917 467 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 MGAT1P26572 445 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 CALRP27797 417 aaKnown RBP9.09□□□□□ -0.95
TDP1-210ENST00000554976 SEC24CP53992 1094 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 SLC18A2Q05940 514 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 TMEM240Q5SV17 173 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 ALG1LQ6GMV1 187 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms