RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 VPS37BQ9H9H4 285 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 PRDM16Q9HAZ2 1276 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 PNPLA8Q9NP80 782 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 TRPV5Q9NQA5 729 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 CYLDQ9NQC7 956 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-205ENST00000554803 HCFC1R1Q9NWW0 138 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 MIOSQ9NXC5 875 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 DNMT3BQ9UBC3 853 aaKnown RBP11.44□□□□□ -0.58
SRP54-205ENST00000554803 STOML1Q9UBI4 398 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 ADAM28Q9UKQ2 775 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 CORO1CQ9ULV4 474 aaPredicted RBP11.44□□□□□ -0.58
SRP54-205ENST00000554803 LRRC42Q9Y546 428 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 PCDHGA5Q9Y5G8 931 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 PIAS3Q9Y6X2 628 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 THADAQ6YHU6 1953 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ASXL3Q9C0F0 2248 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ARL5CA6NH57 179 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 A8MXQ7 604 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
SRP54-205ENST00000554803 FCARP24071 287 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 FOXN2P32314 431 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 PCK1P35558 622 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 MLH1P40692 756 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
SRP54-205ENST00000554803 SNX16P57768 344 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 TFDP2Q14188 446 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 LRRC32Q14392 662 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 GRM2Q14416 872 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 STILQ15468 1287 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 TRIP13Q15645 432 aaPredicted RBP11.43□□□□□ -0.58
SRP54-205ENST00000554803 GLRA4Q5JXX5 417 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 RTP2Q5QGT7 225 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 CGB2Q6NT52 195 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 PRSS55Q6UWB4 352 aaPredicted RBP11.43□□□□□ -0.58
SRP54-205ENST00000554803 MFSD7Q6UXD7 560 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ALKAL1Q6UXT8 129 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ABCA7Q8IZY2 2146 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 CYP4X1Q8N118 509 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 SLC7A14Q8TBB6 771 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 TBC1D31Q96DN5 1066 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 MTBPQ96DY7 904 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 STAMBPL1Q96FJ0 436 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 C9orf72Q96LT7 481 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 RMDN2Q96LZ7 410 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ZFP42Q96MM3 310 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 HERPUD2Q9BSE4 406 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 CCDC28BQ9BUN5 200 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 TRMT61BQ9BVS5 477 aaKnown RBP11.43□□□□□ -0.58
SRP54-205ENST00000554803 HEMGNQ9BXL5 484 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 FAM96AQ9H5X1 160 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ZNF334Q9HCZ1 680 aaPredicted RBP11.43□□□□□ -0.58
SRP54-205ENST00000554803 ACP6Q9NPH0 428 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 VPS45Q9NRW7 570 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 ZNF180Q9UJW8 692 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 DNPEPQ9ULA0 475 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 KIAA1257Q9ULG3 409 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 SUFUQ9UMX1 484 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 MRPS23Q9Y3D9 190 aaKnown RBP11.43□□□□□ -0.58
SRP54-205ENST00000554803 IKBKGQ9Y6K9 419 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 TSC2P49815 1807 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 APC2O95996 2303 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 TENM4Q6N022 2769 aa11.43□□□□□ -0.58
SRP54-205ENST00000554803 APOC4-APOC2K7ER74 178 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 SGK1O00141 431 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 PTGESO14684 152 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 TRDMT1O14717 391 aaKnown RBP11.42□□□□□ -0.58
SRP54-205ENST00000554803 MCF2LO15068 1137 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 CHADO15335 359 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 APOC2P02655 101 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 P4HA1P13674 534 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 ACADSP16219 412 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 CD58P19256 250 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 GCAP28676 217 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 MPLP40238 635 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 SCNN1GP51170 649 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 IRX1P78414 480 aaPredicted RBP11.42□□□□□ -0.58
SRP54-205ENST00000554803 TFAMQ00059 246 aaKnown RBP11.42□□□□□ -0.58
SRP54-205ENST00000554803 PDIA2Q13087 525 aaKnown RBP11.42□□□□□ -0.58
SRP54-205ENST00000554803 BLMHQ13867 455 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 TMEM132DQ14C87 1099 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 NAA25Q14CX7 972 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 SLC5A9Q2M3M2 681 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 ANKRD20A2Q5SQ80 823 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 SH3PXD2AQ5TCZ1 1133 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 ANKRD20A1Q5TYW2 823 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 ANKRD20A3Q5VUR7 823 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 CPNE8Q86YQ8 564 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 ZBED8Q8IZ13 594 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 NAT8LQ8N9F0 302 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 ZNF75CPQ92670 426 aaPredicted RBP11.42□□□□□ -0.58
SRP54-205ENST00000554803 C18orf25Q96B23 403 aaPredicted RBP11.42□□□□□ -0.58
SRP54-205ENST00000554803 GAD1Q99259 594 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 PI4K2AQ9BTU6 479 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 MYLK2Q9H1R3 596 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 SMOC1Q9H4F8 434 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 CNTN3Q9P232 1028 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms