RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TTC34A8MYJ7 566 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 WNT9AO14904 365 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 WNT1P04628 370 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 KRT5P13647 590 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 VAV1P15498 845 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 RDXP35241 583 aaKnown RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 CLCN1P35523 988 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 STK19P49842 368 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 METAP1P53582 386 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 GALCP54803 685 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 ADKP55263 362 aaKnown RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 IL9RQ01113 521 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 CDH18Q13634 790 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 TAF5Q15542 800 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 CST6Q15828 149 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 MEA1Q16626 185 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 TTC31Q49AM3 519 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 RAP1GAP2Q684P5 730 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 KIAA0895LQ68EN5 471 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 NCEH1Q6PIU2 408 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 USP30Q70CQ3 517 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 BEND5Q7L4P6 421 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 AADATQ8N5Z0 425 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 MDM1Q8TC05 714 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 RHBDD1Q8TEB9 315 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 SYN2Q92777 582 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 IGSF8Q969P0 613 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 SLC6A18Q96N87 628 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 FAM129BQ96TA1 746 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 PRMT1Q99873 361 aaKnown RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 SGK2Q9HBY8 427 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 ST7Q9NRC1 585 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 ZNHIT6Q9NWK9 470 aaKnown RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 FBXL12Q9NXK8 326 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 KIAA1522Q9P206 1035 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 SUN2Q9UH99 717 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 SLCO3A1Q9UIG8 710 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 PYCARDQ9ULZ3 195 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 FASNP49327 2511 aaKnown RBP10.92□□□□□ -0.66
SHMT2-215ENST00000554656 A0A1W2PPC4 97 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 GOLGA8CPA6NN73 597 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 PCDHGA12O60330 932 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
SHMT2-215ENST00000554656 ASLP04424 464 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 TACR2P21452 398 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 CCT8P50990 548 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 IRAK1P51617 712 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 SHBQ15464 509 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 TEAD4Q15561 434 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 TMPRSS7Q7RTY8 843 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 TMEM110Q86TL2 294 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 CHSY1Q86X52 802 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 MMAAQ8IVH4 418 aaKnown RBP10.91□□□□□ -0.66
SHMT2-215ENST00000554656 STK40Q8N2I9 435 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 ZNF557Q8N988 423 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-215ENST00000554656 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 OR52K2Q8NGK3 314 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 STK32AQ8WU08 396 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 ZNF606Q8WXB4 792 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 PTPRN2Q92932 1015 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 RPL10LQ96L21 214 aaKnown RBP10.91□□□□□ -0.66
SHMT2-215ENST00000554656 CDC6Q99741 560 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 NEUROG2Q9H2A3 272 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 GANQ9H2C0 597 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 UBE2TQ9NPD8 197 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-215ENST00000554656 ADAMTS1Q9UHI8 967 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 AJAP1Q9UKB5 411 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-215ENST00000554656 GPSM3Q9Y4H4 160 aa10.91□□□□□ -0.66
SHMT2-215ENST00000554656 DOCK4Q8N1I0 1966 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 A0A1W2PR77 199 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 GOLGA6L9A6NEM1 432 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 FAM47DPA6NHR8 397 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 CBX4O00257 560 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 PLK4O00444 970 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 VILLO15195 856 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 SART1O43290 800 aaKnown RBP10.9□□□□□ -0.66
SHMT2-215ENST00000554656 ZSCAN12O43309 604 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 THAP12O43422 761 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 TUBB4AP04350 444 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 SRPRAP08240 638 aaKnown RBP10.9□□□□□ -0.66
SHMT2-215ENST00000554656 PON1P27169 355 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 MZF1P28698 734 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-215ENST00000554656 GNA15P30679 374 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 SLC8A1P32418 973 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 DRD3P35462 400 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 ACADSBP45954 432 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 PSMD8P48556 350 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 ADPRHP54922 357 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 ST8SIA6P61647 398 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 PPP2CBP62714 309 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 PPP2CAP67775 309 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 ECT2LQ008S8 904 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 CENPCQ03188 943 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 PDCLQ13371 301 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 PRAMEF14Q5SWL7 426 aa10.9□□□□□ -0.66
SHMT2-215ENST00000554656 OTUD1Q5VV17 481 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-215ENST00000554656 CXorf57Q6NSI4 855 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms