RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 UBXN10Q96LJ8 280 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 ZNF396Q96N95 335 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 ZNF830Q96NB3 372 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 SLC26A6Q9BXS9 759 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 CD209Q9NNX6 404 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 VPS45Q9NRW7 570 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 NKIRAS2Q9NYR9 191 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 PDP2Q9P2J9 529 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 ORC3Q9UBD5 711 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 GJD2Q9UKL4 321 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 MAFFQ9ULX9 164 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 PCDHA7Q9UN72 937 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 MAGED2Q9UNF1 606 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 FZD1Q9UP38 647 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 MAN2B2Q9Y2E5 1009 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 MRPS17Q9Y2R5 130 aaKnown RBP5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 CRYL1Q9Y2S2 319 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 KIF3AQ9Y496 699 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 PCDHAC2Q9Y5I4 1007 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 LAMB1P07942 1786 aa5.6□□□□□ -1.51
MTHFD1-206ENST00000554353 LAMA3Q16787 3333 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 KIAA0100Q14667 2235 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 NID2Q14112 1375 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 NEDD4P46934 1319 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 MYH13Q9UKX3 1938 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 GOLGA6L4A6NEF3 574 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 MARCH11A6NNE9 402 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 TRIAP1O43715 76 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 IDH1O75874 414 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 GFPT2O94808 682 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 CD4P01730 458 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 CSTBP04080 98 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 TPH1P17752 444 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 BTF3P20290 206 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 LRPAP1P30533 357 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 KIF5BP33176 963 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 PTDSS1P48651 473 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 CPT1AP50416 773 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 VAV2P52735 878 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 PRKAG1P54619 331 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 KRT83P78385 493 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 DGCR2P98153 550 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 MPP1Q00013 466 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 GUCY1B3Q02153 619 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 CEBPZQ03701 1054 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 MTA1Q13330 715 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 HLXQ14774 488 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 STARD3Q14849 445 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 PLCB4Q15147 1175 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 DLGAP5Q15398 846 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 MPEG1Q2M385 716 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 ZIK1Q3SY52 487 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 TTC31Q49AM3 519 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 RILPL1Q5EBL4 403 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 DNAJC21Q5F1R6 531 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 RBM20Q5T481 1227 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 KIAA1614Q5VZ46 1190 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 ITPRIPL1Q6GPH6 555 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 TMCO3Q6UWJ1 677 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 FASTKD5Q7L8L6 764 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 ARMC9Q7Z3E5 817 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 TMPRSS9Q7Z410 1059 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 KCTD20Q7Z5Y7 419 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 GALNT5Q7Z7M9 940 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 LUZP1Q86V48 1076 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 PLA2G4DQ86XP0 818 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 RAB11FIP4Q86YS3 637 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 CERS5Q8N5B7 392 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 ZNF713Q8N859 430 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 FANCBQ8NB91 859 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 LINC00301Q8NCQ3 95 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 CCDC150Q8NCX0 1101 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 BICD2Q8TD16 824 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 BPIFB1Q8TDL5 484 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 SMCR8Q8TEV9 937 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 PIBF1Q8WXW3 757 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 ADAM2Q99965 735 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 PTDSS2Q9BVG9 487 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 MAGEB5Q9BZ81 275 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 DEFB129Q9H1M3 183 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 R3HDMLQ9H3Y0 253 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 ZNF703Q9H7S9 590 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 TTC12Q9H892 705 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 UNKLQ9H9P5 680 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 XPNPEP3Q9NQH7 507 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 ITM2CQ9NQX7 267 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 GRHPRQ9UBQ7 328 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 CLIC4Q9Y696 253 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 COL6A3P12111 3177 aa5.59□□□□□ -1.51
MTHFD1-206ENST00000554353 OTOFQ9HC10 1997 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 MYH6P13533 1939 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 MYH2Q9UKX2 1941 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 CLRN2A0PK11 232 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 AREL1O15033 823 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 ADAMTS3O15072 1205 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 CTAGE5O15320 804 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 RGS10O43665 173 aa5.58□□□□□ -1.52
MTHFD1-206ENST00000554353 LPXNO60711 386 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms