RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 INTS13Q9NVM9 706 aa17.5■□□□□ 0.39
NEK9-204ENST00000554258 FANCLQ9NW38 375 aa17.5■□□□□ 0.39
NEK9-204ENST00000554258 CCDC187A0A096LP49 1063 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 LY6G6EA0A0G2JKS1 128 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 LRRIQ3A6PVS8 624 aaPredicted RBP17.49■□□□□ 0.39
NEK9-204ENST00000554258 C10orf142B7Z368 130 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 AP1G2O75843 785 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 HMBSP08397 361 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 RARGP13631 454 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 CORO1AP31146 461 aaKnown RBP17.49■□□□□ 0.39
NEK9-204ENST00000554258 AP3M2P53677 418 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 DLG4P78352 724 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 PDE4CQ08493 712 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 STAT4Q14765 748 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 CST6Q15828 149 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 MANEAQ5SRI9 462 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 JAMLQ86YT9 394 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 WDR49Q8IV35 697 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 OR14C36Q8NHC7 312 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 DCLK3Q9C098 648 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 MTG2Q9H4K7 406 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 KRT82Q9NSB4 513 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 NLGN3Q9NZ94 848 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 SEPT10Q9P0V9 454 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 U3KQA8 63 aa17.49■□□□□ 0.39
NEK9-204ENST00000554258 SPENQ96T58 3664 aaKnown RBP17.48■□□□□ 0.39
NEK9-204ENST00000554258 LRRC10BA6NIK2 292 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 PMM2O15305 246 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 LATO43561 262 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 RTN2O75298 545 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 DLDP09622 509 aaKnown RBP17.48■□□□□ 0.39
NEK9-204ENST00000554258 GIMD1P0DJR0 217 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 KRT13P13646 458 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 EEF1GP26641 437 aaKnown RBP17.48■□□□□ 0.39
NEK9-204ENST00000554258 HLA-FP30511 346 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 GTF2H1P32780 548 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 ADPRHP54922 357 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 PPP2CBP62714 309 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 TNNC1P63316 161 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 PPP2CAP67775 309 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 KCNAB2Q13303 367 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 DUOXA2Q1HG44 320 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 ZNF787Q6DD87 383 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 PRPF39Q86UA1 669 aaKnown RBP17.48■□□□□ 0.39
NEK9-204ENST00000554258 FAM114A1Q8IWE2 563 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 HTR3CQ8WXA8 447 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 SLC35C1Q96A29 364 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 CCDC127Q96BQ5 260 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
NEK9-204ENST00000554258 PCDHGA7Q9Y5G6 932 aa17.48■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3DA0A087WVF3 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3IA0A087WXS9 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3EA0A087X179 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3KA0A087X1G2 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 CPED1A4D0V7 1026 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3FA6NER0 549 aaPredicted RBP17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3LB9A6J9 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
NEK9-204ENST00000554258 ATP5BP06576 529 aaKnown RBP17.47■□□□□ 0.39
NEK9-204ENST00000554258 FAM163BP0C2L3 166 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3HP0C7X1 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 LIPCP11150 499 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 PPP3CAQ08209 521 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 CCDC40Q4G0X9 1142 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TCP11X2Q5H9J9 407 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3GQ6DHY5 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3CQ6IPX1 549 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 PAQR9Q6ZVX9 377 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 SND1Q7KZF4 910 aaKnown RBP eCLIP17.47■□□□□ 0.39
NEK9-204ENST00000554258 TADA2BQ86TJ2 420 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 ADIPOR2Q86V24 386 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 VASH2Q86V25 355 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 LUZP1Q86V48 1076 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 GAS2L3Q86XJ1 694 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 DENND1CQ8IV53 801 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 MMAAQ8IVH4 418 aaKnown RBP17.47■□□□□ 0.39
NEK9-204ENST00000554258 TBC1D3Q8IZP1 549 aaPredicted RBP17.47■□□□□ 0.39
NEK9-204ENST00000554258 CPXM2Q8N436 756 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 TPCN2Q8NHX9 752 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 ZNF768Q9H5H4 540 aaKnown RBP17.47■□□□□ 0.39
NEK9-204ENST00000554258 ABCB8Q9NUT2 735 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 AGO1Q9UL18 857 aaKnown RBP17.47■□□□□ 0.39
NEK9-204ENST00000554258 SCML2Q9UQR0 700 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 CELSR1Q9NYQ6 3014 aa17.47■□□□□ 0.39
NEK9-204ENST00000554258 NYNRINQ9P2P1 1898 aaKnown RBP17.46■□□□□ 0.39
NEK9-204ENST00000554258 NF1P21359 2839 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.46■□□□□ 0.39
NEK9-204ENST00000554258 A0A1W2PQH9 124 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 NEMP2A6NFY4 417 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 BECN2A8MW95 431 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 SIN3BO75182 1162 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 TCEA3O75764 348 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 PIAS2O75928 621 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 DLATP10515 647 aaKnown RBP17.46■□□□□ 0.39
NEK9-204ENST00000554258 TNNI1P19237 187 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 MAT2AP31153 395 aaKnown RBP17.46■□□□□ 0.39
NEK9-204ENST00000554258 SLC8A1P32418 973 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 COG7P83436 770 aa17.46■□□□□ 0.39
NEK9-204ENST00000554258 ZNF177Q13360 481 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms