RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ANKRD20A4Q4UJ75 823 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 GRTP1Q5TC63 336 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 FAM43BQ6ZT52 329 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 USP50Q70EL3 339 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 GTF3C2Q8WUA4 911 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 PCED1BQ96HM7 432 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 MLPHQ9BV36 600 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 C20orf96Q9NUD7 363 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 ANGPTL2Q9UKU9 493 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 ZNF195O14628 629 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 NFKB1P19838 968 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 SPRP35270 261 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 SERPINB8P50452 374 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 LIMK2P53671 638 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 AP2B1P63010 937 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 NAB1Q13506 487 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 DBN1Q16643 649 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 XKR4Q5GH76 650 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 OLFML2BQ68BL8 750 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 IZUMO2Q6UXV1 221 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 MYLK4Q86YV6 388 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 SMOQ99835 787 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 SIKE1Q9BRV8 207 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 C1orf21Q9H246 121 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 COG4Q9H9E3 785 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 NDE1Q9NXR1 346 aa14.88□□□□□ -0.03
ACTN1-211ENST00000553882 SF3B1O75533 1304 aaKnown RBP eCLIP14.88□□□□□ -0.03
ACTN1-211ENST00000553882 KLHL2O95198 593 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 HSPA4LO95757 839 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 LTFP02788 710 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 AXLP30530 894 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 DAOAP59103 153 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 INSCQ1MX18 579 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 CFAP157Q5JU67 520 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 TMEM135Q86UB9 458 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 KCNMB4Q86W47 210 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 USP33Q8TEY7 942 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 KCTD13Q8WZ19 329 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 IARS2Q9NSE4 1012 aaKnown RBP14.87□□□□□ -0.03
ACTN1-211ENST00000553882 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 C2P06681 752 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 MYL3P08590 195 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 CD1EP15812 388 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 ZRSR2Q15696 482 aaKnown RBP14.87□□□□□ -0.03
ACTN1-211ENST00000553882 IRGCQ6NXR0 463 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 PLEKHH3Q7Z736 793 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 ZMIZ2Q8NF64 920 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 URGCPQ8TCY9 931 aa14.87□□□□□ -0.03
ACTN1-211ENST00000553882 GOLGA8QA0A0J9YX86 632 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 GOLGA8OA6NCC3 632 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 GOLGA8NF8WBI6 632 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 GABRDO14764 452 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 JCHAINP01591 159 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 ATP5BP06576 529 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 CCR10P46092 362 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 PPIDQ08752 370 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 SEMA3BQ13214 749 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 MPP3Q13368 585 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 PCBP1Q15365 356 aaKnown RBP eCLIP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 CCDC153Q494R4 210 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 SLC9B1Q4ZJI4 515 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 TCHHL1Q5QJ38 904 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 FRMD7Q6ZUT3 714 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 PDZD4Q76G19 769 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 FAM35AQ86V20 835 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 MAPK15Q8TD08 544 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 SLC26A7Q8TE54 656 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 ZC3H15Q8WU90 426 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 COLEC11Q9BWP8 271 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 TKTL2Q9H0I9 626 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 DNAJC28Q9NX36 388 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 OR12D3Q9UGF7 316 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 FBXW11Q9UKB1 542 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 SLC39A10Q9ULF5 831 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 ENO4A6NNW6 628 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 G3V2L1 256 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 TK2O00142 265 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 ZBTB14O43829 449 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 CHRNGP07510 517 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 UBTFL6P0CB48 400 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 CYP2B6P20813 491 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 SP100P23497 879 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 NMBRP28336 390 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 GLRBP48167 497 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 CLCNKBP51801 687 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 PAN2Q504Q3 1202 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 RAPH1Q70E73 1250 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 DEFB107AQ8IZN7 70 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 C3orf58Q8NDZ4 430 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 LPPQ93052 612 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 VPS39Q96JC1 886 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 GAD1Q99259 594 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 GBA3Q9H227 469 aa14.86□□□□□ -0.03
ACTN1-211ENST00000553882 STN1Q9H668 368 aaKnown RBP14.86□□□□□ -0.03
ACTN1-211ENST00000553882 WDCPQ9H6R7 721 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms