RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ZNF213O14771 459 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 DCLK1O15075 740 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 AKR1B10O60218 316 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 FAM20BO75063 409 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 ITGA10O75578 1167 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 ZNF202O95125 648 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 APBB3O95704 486 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 ENGP17813 658 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 FCARP24071 287 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 GPR3P46089 330 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 CSRP3P50461 194 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 HAND2P61296 217 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 SLC25A3Q00325 362 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 GRSF1Q12849 480 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 MUM1Q2TAK8 710 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 RABL3Q5HYI8 236 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 IFIT1BQ5T764 474 aaKnown RBP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 CYP4A22Q5TCH4 519 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 VPS53Q5VIR6 699 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 FNDC7Q5VTL7 733 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 PMS2CLQ68D20 193 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 VITQ6UXI7 678 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 HTR3DQ70Z44 454 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 CATSPER4Q7RTX7 472 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 KCNK18Q7Z418 384 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 DDX42Q86XP3 938 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 XYLT1Q86Y38 959 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 LRRC71Q8N4P6 559 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 LILRA3Q8N6C8 439 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 ENAHQ8N8S7 591 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 GPR156Q8NFN8 814 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 WBP1Q96G27 269 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 ZNF668Q96K58 619 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 B3GALT6Q96L58 329 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 CLSTN3Q9BQT9 956 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 MXRA8Q9BRK3 442 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 UBAC1Q9BSL1 405 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 TTPALQ9BTX7 342 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 GPR88Q9GZN0 384 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 PRORYQ9H606 182 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 PSTPIP2Q9H939 334 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 TRPV4Q9HBA0 871 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 HELLSQ9NRZ9 838 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 HCFC1R1Q9NWW0 138 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 MAD2L2Q9UI95 211 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 ADAM28Q9UKQ2 775 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 REXO2Q9Y3B8 237 aaKnown RBP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 SF3B1O75533 1304 aaKnown RBP eCLIP6.45□□□□□ -1.384e-12■■■■■ 275.7
ATXN3-223ENST00000553686 URB1O60287 2271 aaKnown RBP6.45□□□□□ -1.38
ATXN3-223ENST00000553686 ANKRD17O75179 2603 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 SLC38A8A6NNN8 435 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 RRP8O43159 456 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 PHF2O75151 1096 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 CSDE1O75534 798 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 FTH1P19P0C7X4 201 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 CEBPBP17676 345 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 HOXC13P31276 330 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 ELF1P32519 619 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 DHPSP49366 369 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 FAM193AP78312 1265 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 SRSF2Q01130 221 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 GFPT1Q06210 699 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 DSC1Q08554 894 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 SLC14A1Q13336 389 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 PON2Q15165 354 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 PSMD5Q16401 504 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 SLC5A9Q2M3M2 681 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 TAF1BQ53T94 588 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 DCAF17Q5H9S7 520 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 RNF187Q5TA31 235 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 NAIF1Q69YI7 327 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 PRSS55Q6UWB4 352 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 TRMT1LQ7Z2T5 733 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 CEP57Q86XR8 500 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 SYT12Q8IV01 421 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 CCDC60Q8IWA6 550 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 LINC01465Q8N7H1 131 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 CEP76Q8TAP6 659 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 EXOC4Q96A65 974 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 SORCS2Q96PQ0 1159 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 CPEB1Q9BZB8 566 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 CHMP4BQ9H444 224 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 MMRN2Q9H8L6 949 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 LY9Q9HBG7 655 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 DNAJC28Q9NX36 388 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 TCEAL9Q9UHQ7 104 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 MCM8Q9UJA3 840 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 DENND4AQ7Z401 1863 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 SPTAN1Q13813 2472 aaKnown RBP6.44□□□□□ -1.38
ATXN3-223ENST00000553686 TEX15Q9BXT5 2789 aa6.44□□□□□ -1.38
ATXN3-223ENST00000553686 KIAA1671Q9BY89 1806 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 WDR27A2RRH5 827 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 TRABD2BA6NFA1 517 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 ARL5CA6NH57 179 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 HEPACAM2A8MVW5 462 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 E9PAM4 449 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 PEX11BO96011 259 aa6.43□□□□□ -1.38
ATXN3-223ENST00000553686 SLPIP03973 132 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms