RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 KCTD10Q9H3F6 313 aa9.93□□□□□ -0.82
CHD8-205ENST00000553651 PPM1HQ9ULR3 514 aa9.93□□□□□ -0.82
CHD8-205ENST00000553651 SMC3Q9UQE7 1217 aa9.93□□□□□ -0.82
CHD8-205ENST00000553651 MAN2B2Q9Y2E5 1009 aa9.93□□□□□ -0.82
CHD8-205ENST00000553651 SCN8AQ9UQD0 1980 aa9.93□□□□□ -0.82
CHD8-205ENST00000553651 CENPEQ02224 2701 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 EME2A4GXA9 379 aaPredicted RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 XPO1O14980 1071 aaKnown RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 SLC31A1O15431 190 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 EIF5BO60841 1220 aaKnown RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 LUC7L3O95232 432 aaKnown RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 ALPPL2P10696 532 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 TRIM21P19474 475 aaKnown RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 CLDN2P57739 230 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ADIGQ0VDE8 80 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ZNF177Q13360 481 aaPredicted RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 SERINC3Q13530 473 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 FZD2Q14332 565 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 DRAP1Q14919 205 aaPredicted RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 CLCA4Q14CN2 919 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 TBR1Q16650 682 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 CDKN3Q16667 212 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 HS1BP3Q53T59 392 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 DCAF6Q58WW2 860 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ZNF542PQ5EBM4 170 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 MS4A13Q5J8X5 152 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 PIP5KL1Q5T9C9 394 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 RBM44Q6ZP01 1051 aaKnown RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 USP53Q70EK8 1073 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 EFL1Q7Z2Z2 1120 aaKnown RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 CFAP52Q8N1V2 620 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ARL14Q8N4G2 192 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 CARNMT1Q8N4J0 409 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ZNF548Q8NEK5 533 aaPredicted RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 RNF139Q8WU17 664 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 HTR3CQ8WXA8 447 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 KLK6Q92876 244 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 FCRL2Q96LA5 508 aaPredicted RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 FUCA2Q9BTY2 467 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 DUSP23Q9BVJ7 150 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 CUEDC2Q9H467 287 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 PREBQ9HCU5 417 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 FZD3Q9NPG1 666 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ABCC13Q9NSE7 274 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 KLF15Q9UIH9 416 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 ZFR2Q9UPR6 939 aaKnown RBP9.92□□□□□ -0.82
CHD8-205ENST00000553651 PCDHGA7Q9Y5G6 932 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 LRBAP50851 2863 aa9.92□□□□□ -0.82
CHD8-205ENST00000553651 CCDC187A0A096LP49 1063 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 CPED1A4D0V7 1026 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 RNF103O00237 685 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 TCEA3O75764 348 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 SLC5A2P31639 672 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 GCLMP48507 274 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 SLC11A2P49281 568 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
CHD8-205ENST00000553651 DAOAP59103 153 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 MCCD1P59942 119 aaPredicted RBP9.91□□□□□ -0.82
CHD8-205ENST00000553651 FOXK1P85037 733 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 CDH18Q13634 790 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 NUGGCQ68CJ6 796 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 ZCCHC8Q6NZY4 707 aaKnown RBP9.91□□□□□ -0.82
CHD8-205ENST00000553651 FOXR1Q6PIV2 292 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 CRTC1Q6UUV9 634 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 UNC45BQ8IWX7 931 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 KIAA0895Q8NCT3 520 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 GOLGA5Q8TBA6 731 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 KCTD13Q8WZ19 329 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 SEMA4DQ92854 862 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 DHX58Q96C10 678 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 ALG14Q96F25 216 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 LIN37Q96GY3 246 aaPredicted RBP9.91□□□□□ -0.82
CHD8-205ENST00000553651 SLC39A13Q96H72 371 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 BMFQ96LC9 184 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 CALN1Q9BXU9 219 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 BLZF1Q9H2G9 400 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 CISHQ9NSE2 258 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 GEMIN8Q9NWZ8 242 aaKnown RBP9.91□□□□□ -0.82
CHD8-205ENST00000553651 XPO7Q9UIA9 1087 aaKnown RBP9.91□□□□□ -0.82
CHD8-205ENST00000553651 CSNK1G3Q9Y6M4 447 aa9.91□□□□□ -0.82
CHD8-205ENST00000553651 PVALEFA0A1B0GWK0 134 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 A0A1W2PQU0 124 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 NEMP2A6NFY4 417 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 NTN3O00634 580 aaPredicted RBP9.9□□□□□ -0.82
CHD8-205ENST00000553651 ATP9BO43861 1147 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 KLRC4O43908 158 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 GJB6O95452 261 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 CSF2P04141 144 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 NR3C1P04150 777 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 FYNP06241 537 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 CTSLP07711 333 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 TRIM49P0CI25 452 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 TRIM49CP0CI26 452 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 SFTPCP11686 197 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 NME1P15531 152 aaKnown RBP9.9□□□□□ -0.82
CHD8-205ENST00000553651 NASPP49321 788 aaPredicted RBP9.9□□□□□ -0.82
CHD8-205ENST00000553651 NUMBP49757 651 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 VAMP7P51809 220 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 PLK1P53350 603 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms