RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PPP2CAP67775 309 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 ZNF177Q13360 481 aaPredicted RBP18.73■□□□□ 0.59
SHMT2-206ENST00000553529 C5orf22Q49AR2 442 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 DAB2IPQ5VWQ8 1189 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 BAP1Q92560 729 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 FOXJ1Q92949 421 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 VPS28Q9UK41 221 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 FNDC3AQ9Y2H6 1198 aaKnown RBP18.73■□□□□ 0.59
SHMT2-206ENST00000553529 EDDM13A0A1B0GTR0 161 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 SYCE3A1L190 88 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 ATMINO43313 823 aaPredicted RBP18.72■□□□□ 0.59
SHMT2-206ENST00000553529 ENDOD1O94919 500 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 MOCS3O95396 460 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 TPM2P07951 284 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 C7P10643 843 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 RRM1P23921 792 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 OXTRP30559 389 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 SLC8A1P32418 973 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 RDXP35241 583 aaKnown RBP18.72■□□□□ 0.59
SHMT2-206ENST00000553529 RFC1P35251 1148 aaPredicted RBP18.72■□□□□ 0.59
SHMT2-206ENST00000553529 DRD3P35462 400 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 SCNN1AP37088 669 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 PLK1P53350 603 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 FOXC1Q12948 553 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 SEMA3BQ13214 749 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 ACCSLQ4AC99 568 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 WDR45BQ5MNZ6 344 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 BRMS1LQ5PSV4 323 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 SYCP2LQ5T4T6 812 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 NCEH1Q6PIU2 408 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 PYROXD2Q8N2H3 581 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 NETO2Q8NC67 525 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 CADM4Q8NFZ8 388 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 CEP76Q8TAP6 659 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 SLC6A18Q96N87 628 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 BTBD1Q9H0C5 482 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 MUC3BQ9H195 1237 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 VPS51Q9UID3 782 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 NEU3Q9UQ49 428 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 TBC1D30Q9Y2I9 924 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 SPEGQ15772 3267 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 DOCK4Q8N1I0 1966 aa18.72■□□□□ 0.59
SHMT2-206ENST00000553529 A0A1B0GTW7 788 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 TCRBV5S1A1TA0A578 114 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 C2CD4BA6NLJ0 364 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 DRGXA6NNA5 263 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 TMCO5BA8MYB1 307 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 BCAT2O15382 392 aaPredicted RBP18.71■□□□□ 0.59
SHMT2-206ENST00000553529 RTN2O75298 545 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 IL1BP01584 269 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 CTSLP07711 333 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 RHOCP08134 193 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 SRCP12931 536 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 HOXD12P35452 270 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 ATXN3P54252 364 aaPredicted RBP18.71■□□□□ 0.59
SHMT2-206ENST00000553529 GALCP54803 685 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 CDH4P55283 916 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 HDAC4P56524 1084 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 OGDHQ02218 1023 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 PRAMEF14Q5SWL7 426 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 TTC39BQ5VTQ0 682 aaPredicted RBP18.71■□□□□ 0.59
SHMT2-206ENST00000553529 LEKR1Q6ZMV7 388 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 MON1BQ7L1V2 547 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 PIP4P1Q86T03 277 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 ZNF677Q86XU0 584 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 DRC7Q8IY82 874 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 HDDC3Q8N4P3 179 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 CHST14Q8NCH0 376 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 AGPAT1Q99943 283 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 TNKS2Q9H2K2 1166 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 TM9SF3Q9HD45 589 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 RTN4Q9NQC3 1192 aaKnown RBP18.71■□□□□ 0.59
SHMT2-206ENST00000553529 ADAM22Q9P0K1 906 aa18.71■□□□□ 0.59
SHMT2-206ENST00000553529 IGLV3-10A0A075B6K4 115 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 SH3BP5O60239 455 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 WNT1P04628 370 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 ACVRL1P37023 503 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 SNX16P57768 344 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 RPL7AP62424 266 aaKnown RBP18.7■□□□□ 0.58
SHMT2-206ENST00000553529 IL9RQ01113 521 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 ARID5BQ14865 1188 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 IQCB1Q15051 598 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 DLG2Q15700 870 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 KIF19Q2TAC6 998 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 SH2D3CQ8N5H7 860 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 ZNF557Q8N988 423 aaPredicted RBP18.7■□□□□ 0.58
SHMT2-206ENST00000553529 SYT11Q9BT88 431 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 SNX11Q9Y5W9 270 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 DOCK9Q9BZ29 2069 aa18.7■□□□□ 0.58
SHMT2-206ENST00000553529 TARSL2A2RTX5 802 aaKnown RBP18.69■□□□□ 0.58
SHMT2-206ENST00000553529 LRRC53A6NM62 1247 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 CCP110O43303 1012 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 OPHN1O60890 802 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 CLDN11O75508 207 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 NSFP46459 744 aaKnown RBP18.69■□□□□ 0.58
SHMT2-206ENST00000553529 ADPRHP54922 357 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 TTC31Q49AM3 519 aaPredicted RBP18.69■□□□□ 0.58
SHMT2-206ENST00000553529 KIAA0895LQ68EN5 471 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 WDR59Q6PJI9 974 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms