RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 HMCESQ96FZ2 354 aa20.01■□□□□ 0.79
RBFOX1-215ENST00000553186 IL12RB2Q99665 862 aa20.01■□□□□ 0.79
RBFOX1-215ENST00000553186 SMPD4Q9NXE4 827 aa20.01■□□□□ 0.79
RBFOX1-215ENST00000553186 AGO1Q9UL18 857 aaKnown RBP20.01■□□□□ 0.79
RBFOX1-215ENST00000553186 CHMP2BQ9UQN3 213 aa20.01■□□□□ 0.79
RBFOX1-215ENST00000553186 DOCK4Q8N1I0 1966 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 ANAPC1Q9H1A4 1944 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 NRG2O14511 850 aaPredicted RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 TNFAIP8L3Q5GJ75 292 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 CAPN12Q6ZSI9 719 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 ARL14EPQ8N8R7 260 aaPredicted RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 FAM76AQ8TAV0 307 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 ADAMTS19Q8TE59 1207 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 TLCD1Q96CP7 247 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 VPS37BQ9H9H4 285 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 XAB2Q9HCS7 855 aaKnown RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 TRPC7Q9HCX4 862 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 BCCIPQ9P287 314 aaKnown RBP eCLIP20■□□□□ 0.79
RBFOX1-215ENST00000553186 IPO11Q9UI26 975 aaKnown RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 RASA4BC9J798 803 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 RASA4O43374 803 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 CACNG3O60359 315 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 PEX11BO96011 259 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 CA3P07451 260 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 MBL2P11226 248 aaPredicted RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 MAPKAPK2P49137 400 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 KCTD11Q693B1 232 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 TIGD7Q6NT04 549 aaPredicted RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 C3orf62Q6ZUJ4 267 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 CFAP52Q8N1V2 620 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 MICAL1Q8TDZ2 1067 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 PRICKLE1Q96MT3 831 aaPredicted RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 RSPH14Q9UHP6 348 aa20■□□□□ 0.79
RBFOX1-215ENST00000553186 NOVA2Q9UNW9 492 aaKnown RBP20■□□□□ 0.79
RBFOX1-215ENST00000553186 MYO18AQ92614 2054 aaKnown RBP19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 GREM1O60565 184 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 IRF1P10914 325 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 MLNP12872 115 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 TSHRP16473 764 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 HDCP19113 662 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 NFKB1P19838 968 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 LMAN1P49257 510 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 SHHQ15465 462 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 ADGRF1Q5T601 910 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 ITPRIPL1Q6GPH6 555 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 MAML1Q92585 1016 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 LRRC39Q96DD0 335 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 SIGLEC10Q96LC7 697 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 STOML2Q9UJZ1 356 aa19.99■□□□□ 0.79
RBFOX1-215ENST00000553186 ARHGAP42A6NI28 874 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 H3BNC9 293 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 OR1E1P30953 314 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 SARNPP82979 210 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 SMAD3P84022 425 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 CYP4F8P98187 520 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 LRRC8BQ6P9F7 803 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 PALM2Q8IXS6 379 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 KLHDC8BQ8IXV7 354 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 USP33Q8TEY7 942 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 FATE1Q969F0 183 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 CCDC77Q9BR77 488 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 MLPHQ9BV36 600 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 PLAC1Q9HBJ0 212 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 EURLQ9NYK6 297 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 ZFP37Q9Y6Q3 630 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 CCL16O15467 120 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 RGS16O15492 202 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 RAMP2O60895 175 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 AP2A1O95782 977 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 GCAP28676 217 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 MAGEA10P43363 369 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 RPS24P62847 133 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 DNAJC21Q5F1R6 531 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 EMC10Q5UCC4 262 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 ELMOD1Q8N336 334 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 MRPS31Q92665 395 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 RETREG1Q9H6L5 497 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 RABGEF1Q9UJ41 708 aa19.98■□□□□ 0.79
RBFOX1-215ENST00000553186 J3KR12 359 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 SUN1O94901 812 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 SGSHP51688 502 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 YBEYP58557 167 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 MAGOHP61326 146 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 POLD3Q15054 466 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 PARP15Q460N3 678 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 PPM1LQ5SGD2 360 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 RTL10Q7L3V2 364 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 OTOP3Q7RTS5 596 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 CTNNAL1Q9UBT7 734 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 CPQQ9Y646 472 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 NYNRINQ9P2P1 1898 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 CDH23Q9H251 3354 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 A0A1W2PRU2 124 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 TRDMT1O14717 391 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 RFPL2O75678 378 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 C1RP00736 705 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 IVLP07476 585 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 NR1D1P20393 614 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 SPARCL1Q14515 664 aa19.97■□□□□ 0.79
RBFOX1-215ENST00000553186 MPP5Q8N3R9 675 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms