RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ERVW-1Q9UQF0 538 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 HS3ST2Q9Y278 367 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 NCKAP1Q9Y2A7 1128 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 RAD54BQ9Y620 910 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 KIAA1549LQ6ZVL6 1849 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 PROB1E7EW31 1015 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 AP5Z1O43299 807 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 PSTPIP1O43586 416 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 ATP9BO43861 1147 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 LRP3O75074 770 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 ADH1BP00325 375 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 C7P10643 843 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 MSNP26038 577 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 CD70P32970 193 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 MAPK8P45983 427 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 RENBPP51606 427 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 VAV2P52735 878 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 SATB1Q01826 763 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 SEMA3BQ13214 749 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 CAMK2GQ13555 558 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 RFTN1Q14699 578 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 INO80DQ53TQ3 878 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 PPP6R3Q5H9R7 873 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 SH3PXD2AQ5TCZ1 1133 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 EGFLAMQ63HQ2 1017 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 ZNF776Q68DI1 518 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 C11orf63Q6NUN7 778 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 TMCO3Q6UWJ1 677 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 RFX8Q6ZV50 586 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 CEP68Q76N32 757 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 RASSF3Q86WH2 238 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 ZNF354CQ86Y25 554 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 ZNF683Q8IZ20 524 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 CCDC33Q8N5R6 958 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 PCDH20Q8N6Y1 951 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 CCDC185Q8N715 623 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 SPC24Q8NBT2 197 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 OR2T3Q8NH03 318 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 GAB3Q8WWW8 586 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 OR8D1Q8WZ84 308 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 NKD2Q969F2 451 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 SIPA1Q96FS4 1042 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 PPP1R16AQ96I34 528 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 FERMT1Q9BQL6 677 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 SNRNP25Q9BV90 132 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 BRD8Q9H0E9 1235 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 CALCOCO1Q9P1Z2 691 aa10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 MYO18AQ92614 2054 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-208ENST00000552890 TCRBV21S2A2A0A5A6 115 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 C1QTNF3-AMACRE9PGA6 284 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 H0Y858 1186 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 K7ESF4 209 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 SGK1O00141 431 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 MAP3K13O43283 966 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 RPP40O75818 363 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 GJB6O95452 261 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 LMNAP02545 664 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 DNTTP04053 509 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 PRNPP04156 253 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 CES1P23141 567 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 HOXD12P35452 270 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 NUDT1P36639 197 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 HSPA9P38646 679 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 ATXN1P54253 815 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 TFDP2Q14188 446 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 GAS6Q14393 721 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 MESDQ14696 234 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 FUT11Q495W5 492 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 CXorf57Q6NSI4 855 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 USP30Q70CQ3 517 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 TFAP2DQ7Z6R9 452 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 C14orf80Q86SX3 495 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 NLRP14Q86W24 1093 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 ATP11CQ8NB49 1132 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 KIAA1524Q8TCG1 905 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 FAM122AQ96E09 287 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 RBM41Q96IZ5 413 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 ZNF599Q96NL3 588 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 SPON2Q9BUD6 331 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 ACE2Q9BYF1 805 aaPredicted RBP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 DYRK4Q9NR20 520 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 CACNA2D2Q9NY47 1150 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 MPP6Q9NZW5 540 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 GMEB2Q9UKD1 530 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 PCDHGA5Q9Y5G8 931 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 KMT2EQ8IZD2 1858 aa10.51□□□□□ -0.73
TRAFD1-208ENST00000552890 PIEZO1Q92508 2521 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 CCDC66A2RUB6 948 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 MIF4GDA9UHW6 222 aaKnown RBP10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 CBX4O00257 560 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 PJA2O43164 708 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 KDELR3O43731 214 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 LILRB5O75023 590 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 ADAM23O75077 832 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 NDUFS2O75306 463 aa10.5□□□□□ -0.73
TRAFD1-208ENST00000552890 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms