RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 EIF3CQ99613 913 aaKnown RBP17.81■□□□□ 0.44
CDK4-208ENST00000551706 EPAS1Q99814 870 aa17.81■□□□□ 0.44
CDK4-208ENST00000551706 POLR3BQ9NW08 1133 aaPredicted RBP17.81■□□□□ 0.44
CDK4-208ENST00000551706 CTTNBP2NLQ9P2B4 639 aa17.81■□□□□ 0.44
CDK4-208ENST00000551706 INTS6Q9UL03 887 aaKnown RBP17.81■□□□□ 0.44
CDK4-208ENST00000551706 GOLGA6L6A8MZA4 724 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 AXIN1O15169 862 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 SYNCRIPO60506 623 aaKnown RBP17.8■□□□□ 0.44
CDK4-208ENST00000551706 CNTN5O94779 1100 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 LRIG2O94898 1065 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 RHOCP08134 193 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 HTR7P34969 479 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 IL12RB1P42701 662 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 WASP42768 502 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 ST8SIA6P61647 398 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 FNDC3BQ53EP0 1204 aaKnown RBP17.8■□□□□ 0.44
CDK4-208ENST00000551706 RNF219Q5W0B1 726 aaPredicted RBP17.8■□□□□ 0.44
CDK4-208ENST00000551706 HEATR6Q6AI08 1181 aaKnown RBP17.8■□□□□ 0.44
CDK4-208ENST00000551706 RWDD4Q6NW29 188 aaKnown RBP17.8■□□□□ 0.44
CDK4-208ENST00000551706 ZNF783Q6ZMS7 281 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 RASSF3Q86WH2 238 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
CDK4-208ENST00000551706 ZNF564Q8TBZ8 553 aaPredicted RBP17.8■□□□□ 0.44
CDK4-208ENST00000551706 CYB5D2Q8WUJ1 264 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 COL26A1Q96A83 441 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 TBC1D31Q96DN5 1066 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 FEM1AQ9BSK4 669 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 SPTLC3Q9NUV7 552 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 MPP6Q9NZW5 540 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 INTUQ9ULD6 942 aa17.8■□□□□ 0.44
CDK4-208ENST00000551706 A0A1W2PQF6 199 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 TCRBV21S2A2A0A5A6 115 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 LRCH4O75427 683 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 KCNK5O95279 499 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 SRPRAP08240 638 aaKnown RBP17.79■□□□□ 0.44
CDK4-208ENST00000551706 RHOQP17081 205 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 MZF1P28698 734 aaPredicted RBP17.79■□□□□ 0.44
CDK4-208ENST00000551706 MIPP30301 263 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 OR1E1P30953 314 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 CYLC1P35663 651 aaPredicted RBP17.79■□□□□ 0.44
CDK4-208ENST00000551706 MAPKAPK2P49137 400 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 ECT2LQ008S8 904 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 SF3A2Q15428 464 aaKnown RBP17.79■□□□□ 0.44
CDK4-208ENST00000551706 PTPRNQ16849 979 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 ARTNQ5T4W7 220 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 ERMARDQ5T6L9 678 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 ANO7Q6IWH7 933 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 CEP68Q76N32 757 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 TFAP2DQ7Z6R9 452 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 TMTC1Q8IUR5 882 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 ARFGAP1Q8N6T3 406 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 KDF1Q8NAX2 398 aaPredicted RBP17.79■□□□□ 0.44
CDK4-208ENST00000551706 PACSIN1Q9BY11 444 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 MUC3BQ9H195 1237 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 TMEM245Q9H330 911 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 LUC7LQ9NQ29 371 aaKnown RBP17.79■□□□□ 0.44
CDK4-208ENST00000551706 DONSONQ9NYP3 566 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 AP4E1Q9UPM8 1137 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 IGF2RP11717 2491 aa17.79■□□□□ 0.44
CDK4-208ENST00000551706 ILVBLA1L0T0 632 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 WASH3PC4AMC7 463 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 FAM72CH0Y354 149 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 EPHX1P07099 455 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 FECHP22830 423 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 ETFBP38117 255 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 NNMTP40261 264 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 PXNP49023 591 aaPredicted RBP17.78■□□□□ 0.44
CDK4-208ENST00000551706 ZNF135P52742 658 aaPredicted RBP17.78■□□□□ 0.44
CDK4-208ENST00000551706 KRT83P78385 493 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 SPA17Q15506 151 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 BOLA3Q53S33 107 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 FAM72AQ5TYM5 149 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 FAM72DQ6L9T8 149 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 FAM72BQ86X60 149 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 RHOT2Q8IXI1 618 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 APCDD1Q8J025 514 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 MDGA1Q8NFP4 955 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 ALG14Q96F25 216 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 C2orf49Q9BVC5 232 aaPredicted RBP17.78■□□□□ 0.44
CDK4-208ENST00000551706 TMEM248Q9NWD8 314 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 BCCIPQ9P287 314 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDK4-208ENST00000551706 ZNF212Q9UDV6 495 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 SUN2Q9UH99 717 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 PCSK1NQ9UHG2 260 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 VPS28Q9UK41 221 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 ERVW-1Q9UQF0 538 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 OR51B4Q9Y5P0 310 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 ATG2BQ96BY7 2078 aa17.78■□□□□ 0.44
CDK4-208ENST00000551706 CREB3O43889 395 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 IPO7O95373 1038 aaKnown RBP17.77■□□□□ 0.44
CDK4-208ENST00000551706 LCA5LO95447 670 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 ZNF806P0C7X5 589 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 PRKCHP24723 683 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 EPHB2P29323 1055 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 HOXC13P31276 330 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 VASPP50552 380 aaPredicted RBP17.77■□□□□ 0.44
CDK4-208ENST00000551706 SEMA3BQ13214 749 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 USP39Q53GS9 565 aaKnown RBP17.77■□□□□ 0.44
CDK4-208ENST00000551706 STPG1Q5TH74 334 aa17.77■□□□□ 0.44
CDK4-208ENST00000551706 NLRP14Q86W24 1093 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms