RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 YJEFN3A6XGL0 299 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 I6L893 689 aaPredicted RBP13.32□□□□□ -0.28
CACNB3-219ENST00000551544 ZNF195O14628 629 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 AP2A1O95782 977 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 SAT1P21673 171 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 HARS2P49590 506 aaKnown RBP13.32□□□□□ -0.28
CACNB3-219ENST00000551544 LIMK2P53671 638 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 DSG1Q02413 1049 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 CUL3Q13618 768 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 CCDC153Q494R4 210 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 ANKRD20A4Q4UJ75 823 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 NPWQ8N729 165 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 LENG1Q96BZ8 264 aaPredicted RBP13.32□□□□□ -0.28
CACNB3-219ENST00000551544 COG4Q9H9E3 785 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 PRDM16Q9HAZ2 1276 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 PDP2Q9P2J9 529 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 SNX10Q9Y5X0 201 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 SF3B1O75533 1304 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNB3-219ENST00000551544 FYNP06241 537 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 NCAM1P13591 858 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 CACNA2D1P54289 1103 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 CDC42EP1Q00587 391 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 PDCD2Q16342 344 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 UBXN11Q5T124 520 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 PDZD4Q76G19 769 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 GPR142Q7Z601 462 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 DEFB107AQ8IZN7 70 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 PPP1R36Q96LQ0 422 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ZFP42Q96MM3 310 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 SLC2A13Q96QE2 648 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 DDX50Q9BQ39 737 aaKnown RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 TINF2Q9BSI4 451 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 TRIM4Q9C037 500 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 FAM96AQ9H5X1 160 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ZNF408Q9H9D4 720 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 GPAMQ9HCL2 828 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 CHRAC1Q9NRG0 131 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 C20orf96Q9NUD7 363 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 IPPQ9Y573 584 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 TIMM13Q9Y5L4 95 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ZCWPW2A0A1B0GU75 182 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 SMIM35A0A1B0GVV1 85 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 STRNO43815 780 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 FAM200BP0CF97 657 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 KCNE1P15382 129 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 WARSP23381 471 aaKnown RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 PGGT1BP53609 377 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 SLC5A9Q2M3M2 681 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 KIAA0319Q5VV43 1072 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 FOXB2Q5VYV0 432 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 RAPH1Q70E73 1250 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 BNIPLQ7Z465 357 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 PHC3Q8NDX5 983 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ACVR1CQ8NER5 493 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 NR1H4Q96RI1 486 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 KCNK16Q96T55 309 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ECSITQ9BQ95 431 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ABHD16BQ9H3Z7 469 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 S100A14Q9HCY8 104 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 IARS2Q9NSE4 1012 aaKnown RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 DDIT4Q9NX09 232 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 DDX43Q9NXZ2 648 aaKnown RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 PCDHB12Q9Y5F1 795 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 FKBP6O75344 327 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 C2P06681 752 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 USP17L7P0C7H9 530 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ZCCHC18P0CG32 403 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 CD68P34810 354 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 SLC9B1Q4ZJI4 515 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 TCHHL1Q5QJ38 904 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 FRMD7Q6ZUT3 714 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 TMEM135Q86UB9 458 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 KCNMB4Q86W47 210 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 TOP6BLQ8N6T0 577 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 URGCPQ8TCY9 931 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 MLPHQ9BV36 600 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-219ENST00000551544 ADAM28Q9UKQ2 775 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 CDY2AQ9Y6F7 541 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 CDY1Q9Y6F8 540 aa13.31□□□□□ -0.28
CACNB3-219ENST00000551544 RALGAPA2Q2PPJ7 1873 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 GOLGA8QA0A0J9YX86 632 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 GOLGA8OA6NCC3 632 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.3□□□□□ -0.28
CACNB3-219ENST00000551544 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 GOLGA8NF8WBI6 632 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 G3V2L1 256 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 TREHO43280 583 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 LTFP02788 710 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 ALOX15P16050 662 aaPredicted RBP13.3□□□□□ -0.28
CACNB3-219ENST00000551544 NFKB1P19838 968 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 CDK7P50613 346 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 ASPHQ12797 758 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 CDC16Q13042 620 aa13.3□□□□□ -0.28
CACNB3-219ENST00000551544 MPP3Q13368 585 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms