RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 TTC7BQ86TV6 843 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 RFWD2Q8NHY2 731 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 PPP1R14CQ8TAE6 165 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 RAB3IL1Q8TBN0 382 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 CALML6Q8TD86 181 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 GIPC2Q8TF65 315 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 CAPSLQ8WWF8 208 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 ZNF606Q8WXB4 792 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 LINC01599Q8WXQ3 324 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 GTF3C4Q9UKN8 822 aa21.47■■□□□ 1.03
NPAS3-210ENST00000551492 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.47■■□□□ 1.03
NPAS3-210ENST00000551492 CHD9Q3L8U1 2897 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 AP1G1O43747 822 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 POLR2EP19388 210 aaKnown RBP21.46■■□□□ 1.03
NPAS3-210ENST00000551492 ITGB8P26012 769 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 WEE1P30291 646 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 NDST1P52848 882 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 C21orf59P57076 290 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 XKR5Q6UX68 686 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 ZNF280BQ86YH2 543 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 SLC35G2Q8TBE7 412 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 HEXIM2Q96MH2 286 aaKnown RBP21.46■■□□□ 1.03
NPAS3-210ENST00000551492 KRBA1A5PL33 1030 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 C2orf71A6NGG8 1288 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 MOXD2PA6NHM9 499 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 H2AFZP0C0S5 128 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 ETV3P41162 512 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 BRCC3P46736 316 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 TUBA4AP68366 448 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 GCNT1Q02742 428 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 AADACL2Q6P093 401 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 RGS9BPQ6ZS82 235 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 CYP4V2Q6ZWL3 525 aaPredicted RBP21.46■■□□□ 1.03
NPAS3-210ENST00000551492 H2AFVQ71UI9 128 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 RHOT2Q8IXI1 618 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 OR6B3Q8NGW1 331 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 ARMCX1Q9P291 453 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 HEY2Q9UBP5 337 aa21.46■■□□□ 1.03
NPAS3-210ENST00000551492 CAPN8A6NHC0 703 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 EDF1O60869 148 aaKnown RBP21.45■■□□□ 1.02
NPAS3-210ENST00000551492 IL18RAPO95256 599 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 ZNF12P17014 697 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 YWHAGP61981 247 aaKnown RBP eCLIP21.45■■□□□ 1.02
NPAS3-210ENST00000551492 MYBPC1Q00872 1141 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 DCAF4L1Q3SXM0 396 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 C1orf146Q5VVC0 180 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 DHRS4L2Q6PKH6 230 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 CTU1Q7Z7A3 348 aaKnown RBP21.45■■□□□ 1.02
NPAS3-210ENST00000551492 JAMLQ86YT9 394 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 MED30Q96HR3 178 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 CNBD2Q96M20 576 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 MARCH7Q9H992 704 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 A0A0G2JND7 137 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 GNRH1P01148 92 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 RGS7P49802 495 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 CLUL1Q15846 466 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 C9orf57Q5W0N0 161 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 LPCAT2Q7L5N7 544 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 OTOAQ7RTW8 1153 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 DHDDSQ86SQ9 333 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 FAM126BQ8IXS8 530 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 ELMOD1Q8N336 334 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 CPSF7Q8N684 471 aaKnown RBP21.45■■□□□ 1.02
NPAS3-210ENST00000551492 ATP2A3Q93084 1043 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 C8orf48Q96LL4 319 aa21.45■■□□□ 1.02
NPAS3-210ENST00000551492 MRPS26Q9BYN8 205 aaKnown RBP21.45■■□□□ 1.02
NPAS3-210ENST00000551492 GOLGA8CPA6NN73 597 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 SEC24DO94855 1032 aaPredicted RBP21.44■■□□□ 1.02
NPAS3-210ENST00000551492 ZWINTO95229 277 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 ZNF132P52740 706 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 MDH1BQ5I0G3 518 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 ALKAL1Q6UXT8 129 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 FAM172AQ8WUF8 416 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 ASB7Q9H672 318 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 PCDH12Q9NPG4 1184 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 TBC1D14Q9P2M4 693 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 CYTH4Q9UIA0 394 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 PRG3Q9Y2Y8 225 aaPredicted RBP21.44■■□□□ 1.02
NPAS3-210ENST00000551492 ZC3H11AO75152 810 aaKnown RBP eCLIP21.44■■□□□ 1.02
NPAS3-210ENST00000551492 CDONQ4KMG0 1287 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 DENND1BQ6P3S1 775 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 CDH19Q9H159 772 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 C12orf4Q9NQ89 552 aa21.44■■□□□ 1.02
NPAS3-210ENST00000551492 MTRF1LQ9UGC7 380 aaKnown RBP21.44■■□□□ 1.02
NPAS3-210ENST00000551492 GPR182O15218 404 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 GRAP2O75791 330 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 RRM1P23921 792 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 MLLT3P42568 568 aaPredicted RBP21.43■■□□□ 1.02
NPAS3-210ENST00000551492 SUZ12Q15022 739 aaKnown RBP21.43■■□□□ 1.02
NPAS3-210ENST00000551492 TRIP10Q15642 601 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 GRAMD1BQ3KR37 738 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 CEP78Q5JTW2 689 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 TTC23LQ6PF05 361 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 ZFRQ96KR1 1074 aaKnown RBP21.43■■□□□ 1.02
NPAS3-210ENST00000551492 FERD3LQ96RJ6 166 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 THTPAQ9BU02 230 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 SATB2Q9UPW6 733 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 H3BRJ5 948 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 CLDN5O00501 218 aa21.43■■□□□ 1.02
NPAS3-210ENST00000551492 CES2O00748 559 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms