RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SMAP1Q8IYB5 467 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-214ENST00000550893 DIS3L2Q8IYB7 885 aaKnown RBP5.4□□□□□ -1.54
SCAF11-214ENST00000550893 MYOCDQ8IZQ8 938 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 GLG1Q92896 1179 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 BOD1Q96IK1 185 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 RAD9AQ99638 391 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 HSD17B14Q9BPX1 270 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 MMTAG2Q9BU76 263 aaKnown RBP5.4□□□□□ -1.54
SCAF11-214ENST00000550893 GLT8D2Q9H1C3 349 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 DHX33Q9H6R0 707 aaKnown RBP5.4□□□□□ -1.54
SCAF11-214ENST00000550893 CWH43Q9H720 699 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 SYNPO2LQ9H987 977 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 TMEM74BQ9NUR3 256 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 RGL1Q9NZL6 768 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 KCNE5Q9UJ90 142 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 MTUS1Q9ULD2 1270 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 PCDHA10Q9Y5I2 948 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 MRFAP1Q9Y605 127 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 SQORQ9Y6N5 450 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 DCHS1Q96JQ0 3298 aa5.4□□□□□ -1.55
SCAF11-214ENST00000550893 DMXL1Q9Y485 3027 aa5.4□□□□□ -1.55
SCAF11-214ENST00000550893 DENND4CQ5VZ89 1909 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 CCDC154A6NI56 674 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 RRN3P2A6NIE6 340 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 TBX10O75333 385 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 MED24O75448 989 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 SLITRK3O94933 977 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 LYPLA2O95372 231 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 PARNO95453 639 aaKnown RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 SBK3P0C264 359 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 GNA11P29992 359 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 HOXA11P31270 313 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 SLC26A2P50443 739 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 NLRP5P59047 1200 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 BLOC1S1P78537 153 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 KCNC3Q14003 757 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 NONOQ15233 471 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 CYP2A13Q16696 494 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 PTPN21Q16825 1174 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 LETM2Q2VYF4 491 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 ZNF484Q5JVG2 852 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 FAM102BQ5T8I3 360 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 GALNT17Q6IS24 598 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 FOXR2Q6PJQ5 311 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 DAW1Q8N136 415 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 NLGN4YQ8NFZ3 816 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 RDM1Q8NG50 284 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 IFI44Q8TCB0 444 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 ARNTL2Q8WYA1 636 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 FUBP1Q96AE4 644 aaKnown RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 PNKPQ96T60 521 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 SDF4Q9BRK5 362 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 LXNQ9BS40 222 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 FTOQ9C0B1 505 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 SLC28A3Q9HAS3 691 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 GALNT9Q9HCQ5 603 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 TBC1D22BQ9NU19 505 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 HSFX1Q9UBD0 423 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 TESQ9UGI8 421 aaKnown RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 DDX25Q9UHL0 483 aaKnown RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 CDH22Q9UJ99 828 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
SCAF11-214ENST00000550893 MYO10Q9HD67 2058 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 CFAP54Q96N23 3096 aa5.39□□□□□ -1.55
SCAF11-214ENST00000550893 PTPRDP23468 1912 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 ZDBF2Q9HCK1 2354 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 SCN1AP35498 2009 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 PP2D1A8MPX8 630 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 F8W810 466 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 H3BNC9 293 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 TBX3O15119 743 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 LINC01565O15544 149 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 SGTAO43765 313 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 ZFPL1O95159 310 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 NUDT3O95989 172 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 ACTN1P12814 892 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 DARSP14868 501 aaKnown RBP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 U2AF2P26368 475 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 KRT2P35908 639 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 MPLP40238 635 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 PBX3P40426 434 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 JAK3P52333 1124 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 NLRP11P59045 1033 aaKnown RBP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 HYAL1Q12794 435 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 MAPK7Q13164 816 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 PABPC1LQ4VXU2 614 aaKnown RBP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 MIS18BP1Q6P0N0 1132 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 SLC44A3Q8N4M1 653 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 SLC17A8Q8NDX2 589 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 BICD2Q8TD16 824 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 NEK9Q8TD19 979 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 CCDC12Q8WUD4 166 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 SEPT8Q92599 483 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 APBB2Q92870 758 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 KAT5Q92993 513 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 MRGPRX4Q96LA9 322 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 Q96MF0 132 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms