RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 WASH4PA8MWX3 477 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 RAMP2O60895 175 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 RNASEH1O60930 286 aaKnown RBP15.33■□□□□ 0.04
GPN3-206ENST00000549963 RARAP10276 462 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 TDGF1P13385 188 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 GEMIN4P57678 1058 aaKnown RBP15.33■□□□□ 0.04
GPN3-206ENST00000549963 YBEYP58557 167 aaPredicted RBP15.33■□□□□ 0.04
GPN3-206ENST00000549963 SEMA3BQ13214 749 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 PTPRNQ16849 979 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 ACCSLQ4AC99 568 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 KCNT1Q5JUK3 1230 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 NLRP14Q86W24 1093 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 RTL3Q8N8U3 475 aaKnown RBP15.33■□□□□ 0.04
GPN3-206ENST00000549963 DCAF4L2Q8NA75 395 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 KCTD6Q8NC69 237 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 ZBTB44Q8NCP5 570 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 NELL1Q92832 810 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 RPL10LQ96L21 214 aaKnown RBP15.33■□□□□ 0.04
GPN3-206ENST00000549963 PEBP4Q96S96 227 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 TMEM245Q9H330 911 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.33■□□□□ 0.04
GPN3-206ENST00000549963 POLR3BQ9NW08 1133 aaPredicted RBP15.33■□□□□ 0.04
GPN3-206ENST00000549963 RAB23Q9ULC3 237 aa15.33■□□□□ 0.04
GPN3-206ENST00000549963 FARP1Q9Y4F1 1045 aaPredicted RBP15.33■□□□□ 0.04
GPN3-206ENST00000549963 EDDM13A0A1B0GTR0 161 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 A0A1W2PQF6 199 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 TARSL2A2RTX5 802 aaKnown RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 CBX4O00257 560 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 CHRM1P11229 460 aaPredicted RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 ACADMP11310 421 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 IL1R2P27930 398 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 HOXC13P31276 330 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 PXNP49023 591 aaPredicted RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 HADHBP55084 474 aaKnown RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 SFSWAPQ12872 951 aaKnown RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 PDK2Q15119 407 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 DPYSL2Q16555 572 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 IFI16Q16666 785 aaKnown RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 SMTNL2Q2TAL5 461 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 DAB2IPQ5VWQ8 1189 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 RAD9BQ6WBX8 426 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 RFX8Q6ZV50 586 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 CEP68Q76N32 757 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 C11orf74Q86VG3 221 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 RASSF3Q86WH2 238 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 ATP11CQ8NB49 1132 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 ALG14Q96F25 216 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 KCTD15Q96SI1 283 aaPredicted RBP15.32■□□□□ 0.04
GPN3-206ENST00000549963 PRDM16Q9HAZ2 1276 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 RAPGEFL1Q9UHV5 662 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 OR51B4Q9Y5P0 310 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 RAD54BQ9Y620 910 aa15.32■□□□□ 0.04
GPN3-206ENST00000549963 NUP205Q92621 2012 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 A0A0D9SEW6 157 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 CXorf51AA0A1B0GTR3 108 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 ZSCAN5CA6NGD5 496 aaPredicted RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 SPOPO43791 374 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 ZNF217O75362 1048 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 HLA-EP13747 358 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 GOT1P17174 413 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 PRKCHP24723 683 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 GJC1P36383 396 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 NBL1P41271 181 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 CTSOP43234 321 aaPredicted RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 VAV2P52735 878 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 NDST2P52849 883 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 CDH6P55285 790 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 NHLH1Q02575 133 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 SLC25A11Q02978 314 aaKnown RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 KIF5AQ12840 1032 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 CAMK2GQ13555 558 aaPredicted RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 CA9Q16790 459 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 HNRNPA1L2Q32P51 320 aaKnown RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 PARP15Q460N3 678 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 POLNQ7Z5Q5 900 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 METTL3Q86U44 580 aaKnown RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 LZTR1Q8N653 840 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 OR7D4Q8NG98 312 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 OR52K2Q8NGK3 314 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 OR2T3Q8NH03 318 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 PRCCQ92733 491 aaPredicted RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 ARHGEF2Q92974 986 aaKnown RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 SPACA7Q96KW9 195 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 MRGPRX3Q96LB0 322 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 CWC15Q9P013 229 aaKnown RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 RCOR3Q9P2K3 495 aaPredicted RBP15.31■□□□□ 0.04
GPN3-206ENST00000549963 ZNF212Q9UDV6 495 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 SLCO3A1Q9UIG8 710 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 R4GN57 208 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 FANCMQ8IYD8 2048 aa15.31■□□□□ 0.04
GPN3-206ENST00000549963 ARHGAP42A6NI28 874 aa15.3■□□□□ 0.04
GPN3-206ENST00000549963 BTNL10A8MVZ5 291 aa15.3■□□□□ 0.04
GPN3-206ENST00000549963 ARHGAP6O43182 974 aa15.3■□□□□ 0.04
GPN3-206ENST00000549963 MAP3K13O43283 966 aa15.3■□□□□ 0.04
GPN3-206ENST00000549963 LILRB5O75023 590 aa15.3■□□□□ 0.04
GPN3-206ENST00000549963 RPP40O75818 363 aaKnown RBP15.3■□□□□ 0.04
GPN3-206ENST00000549963 ERCC2P18074 760 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms