RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 SEMA3CQ99985 751 aa11.9□□□□□ -0.5
VDR-206ENST00000549336 VCXQ9H320 206 aa11.9□□□□□ -0.5
VDR-206ENST00000549336 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
VDR-206ENST00000549336 SCAMP3O14828 347 aaKnown RBP11.9□□□□□ -0.51
VDR-206ENST00000549336 ADCK2Q7Z695 626 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 AUTS2Q8WXX7 1259 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 ING5Q8WYH8 240 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 GRAMD1AQ96CP6 724 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 B3GALT6Q96L58 329 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 HERC2P3Q9BVR0 1158 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 LRRC19Q9H756 370 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 SLC24A2Q9UI40 661 aa11.9□□□□□ -0.51
VDR-206ENST00000549336 IL1BP01584 269 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 OR56A5P0C7T3 313 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 MYL2P10916 166 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 HLA-DPA1P20036 260 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 AARSP49588 968 aaKnown RBP eCLIP11.89□□□□□ -0.51
VDR-206ENST00000549336 NDST2P52849 883 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 RBBP7Q16576 425 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 HIST2H2ACQ16777 129 aaPredicted RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 AGBL2Q5U5Z8 902 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 HIST2H2AA3Q6FI13 130 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 SLC26A11Q86WA9 606 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 EIF1ADQ8N9N8 165 aaKnown RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 HNRNPLLQ8WVV9 542 aaKnown RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 ZMAT2Q96NC0 199 aaKnown RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 FIZ1Q96SL8 496 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 CDCA3Q99618 268 aaPredicted RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 DNAJB4Q9UDY4 337 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 FBXW11Q9UKB1 542 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 TELO2Q9Y4R8 837 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 A0A1W2PRU2 124 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 INPPL1O15357 1258 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 LIASO43766 372 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 RPN2P04844 631 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 PEX6Q13608 980 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 SLC29A2Q14542 456 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 FAM26DQ5JW98 314 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 MARCH8Q5T0T0 291 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 TTC30BQ8N4P2 665 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 CFAP61Q8NHU2 1237 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 TIFAQ96CG3 184 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 TSR3Q9UJK0 312 aaKnown RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 A0A1B0GUL6 1792 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 SYCE1LA8MT33 242 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 TRDMT1O14717 391 aaKnown RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 DCTN3O75935 186 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 PRNPP04156 253 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 FGF1P05230 155 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 TAS2R40P59535 323 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 KIF19Q2TAC6 998 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 PCID2Q5JVF3 399 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 SUGP1Q8IWZ8 645 aaKnown RBP11.89□□□□□ -0.51
VDR-206ENST00000549336 CASKIN2Q8WXE0 1202 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 SHDQ96IW2 340 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 STRA6Q9BX79 667 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 CEP41Q9BYV8 373 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 TM6SF2Q9BZW4 377 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 SFXN1Q9H9B4 322 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 MPP6Q9NZW5 540 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 FNIP2Q9P278 1114 aa11.89□□□□□ -0.51
VDR-206ENST00000549336 PER2O15055 1255 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 NCF2P19878 526 aaPredicted RBP11.88□□□□□ -0.51
VDR-206ENST00000549336 CD151P48509 253 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 PFKPQ01813 784 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 PDGFRLQ15198 375 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 SH3RF2Q8TEC5 729 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 ETNK2Q9NVF9 386 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 PCYOX1Q9UHG3 505 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 SUPT3HB4E1H0 165 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 SUPT3HO75486 399 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 RBP1P09455 135 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 PTPN3P26045 913 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 GATMP50440 423 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 GNA12Q03113 381 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 GRSF1Q12849 480 aaKnown RBP eCLIP11.88□□□□□ -0.51
VDR-206ENST00000549336 SF3A3Q12874 501 aaKnown RBP eCLIP11.88□□□□□ -0.51
VDR-206ENST00000549336 AUHQ13825 339 aaKnown RBP11.88□□□□□ -0.51
VDR-206ENST00000549336 LONRF1Q17RB8 773 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 ATP13A4Q4VNC1 1196 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 GBP7Q8N8V2 638 aaPredicted RBP11.88□□□□□ -0.51
VDR-206ENST00000549336 GRIN3AQ8TCU5 1115 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 OSCP1Q8WVF1 389 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 TMEM159Q96B96 161 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 OTUB2Q96DC9 234 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 ZCWPW1Q9H0M4 648 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 ARHGEF4Q9NR80 690 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 IARS2Q9NSE4 1012 aaKnown RBP11.88□□□□□ -0.51
VDR-206ENST00000549336 PCMTD2Q9NV79 361 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 NR2E1Q9Y466 385 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 CCDC195A0A1B0GUA6 201 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 GLRA3O75311 464 aa11.88□□□□□ -0.51
VDR-206ENST00000549336 H2AFYO75367 372 aaKnown RBP11.88□□□□□ -0.51
VDR-206ENST00000549336 CHRNB2P17787 502 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms