RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CTAGE9A4FU28 777 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 SLC16A5O15375 505 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PRAMEF11O60813 436 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PTGS1P23219 599 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 NPY2RP49146 381 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 SULT2A1Q06520 285 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 HNRNPDQ14103 355 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 WDR72Q3MJ13 1102 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 FAM133BQ5BKY9 247 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 EXOSC6Q5RKV6 272 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 AGAP9Q5VTM2 703 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 DENND1BQ6P3S1 775 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PRSS55Q6UWB4 352 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 XKR5Q6UX68 686 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CCNI2Q6ZMN8 369 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 B4GALNT4Q76KP1 1039 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 YTHDF3Q7Z739 585 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 LAPTM4BQ86VI4 370 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 SLC47A2Q86VL8 602 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 METTL23Q86XA0 190 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TMEM192Q8IY95 271 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CPXCR1Q8N123 301 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 MTBPQ96DY7 904 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 IMP4Q96G21 291 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 ZHX3Q9H4I2 956 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TRIM39Q9HCM9 518 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.03□□□□□ -1.68e-7■■■□□ 18.7
SCAF11-212ENST00000549162 TBC1D14Q9P2M4 693 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CDV3Q9UKY7 258 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 EXPH5Q8NEV8 1989 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 LINC01553A4QN01 128 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF840PA6NDX5 716 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 SLC38A8A6NNN8 435 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 DNALI1O14645 258 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF197O14709 1029 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PHACTR2O75167 634 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TTC4O95801 387 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 MMP2P08253 660 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CELA3AP09093 270 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CSE1LP55060 971 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 DNAJB13P59910 316 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TXNL4AP83876 142 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 KIF5AQ12840 1032 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 BIRC3Q13489 604 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 BCL7AQ4VC05 210 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 WASH2PQ6VEQ5 465 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TMC6Q7Z403 805 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF438Q7Z4V0 828 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CDKL3Q8IVW4 592 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 DCAF4L2Q8NA75 395 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 OR52E4Q8NGH9 312 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF564Q8TBZ8 553 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 C18orf8Q96DM3 657 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PABPC5Q96DU9 382 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC42Q96M95 316 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CPXM1Q96SM3 734 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TRIM8Q9BZR9 551 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 HIPK3Q9H422 1215 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 NT5DC2Q9H857 520 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 WASH6PQ9NQA3 447 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 SAR1BQ9Y6B6 198 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 CACNB4O00305 520 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 TLL1O43897 1013 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 SLU7O95391 586 aaKnown RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 TGDSO95455 350 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 MMEP08473 750 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 MYL3P08590 195 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 LCP1P13796 627 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 HOXB6P17509 224 aaKnown RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 OGNP20774 298 aaKnown RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 GGT5P36269 586 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 STARD6P59095 220 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 PDE1BQ01064 536 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 SLMAPQ14BN4 828 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 PARP6Q2NL67 630 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 ANKRD54Q6NXT1 300 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 FAM183BPQ6ZVS7 135 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 RAB44Q7Z6P3 723 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 C11orf74Q86VG3 221 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 HOXB13Q92826 284 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 USP13Q92995 863 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 ARHGEF26Q96DR7 871 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 ZBTB45Q96K62 511 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-212ENST00000549162 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 NUDCD1Q96RS6 583 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 PEBP4Q96S96 227 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 TCF12Q99081 682 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 YIPF4Q9BSR8 244 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 SELENOOQ9BVL4 669 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 RASSF4Q9H2L5 321 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 SUV39H2Q9H5I1 410 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 EVA1AQ9H8M9 152 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 CALCOCO1Q9P1Z2 691 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 VPS9D1Q9Y2B5 631 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 FAM237BA0A1B0GVD1 139 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 DYTNA2CJ06 578 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 IGLON5A6NGN9 336 aa5.02□□□□□ -1.61
SCAF11-212ENST00000549162 EREGO14944 169 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms