RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 EIF2AQ9BY44 585 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 COPS7BQ9H9Q2 264 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 VCX3AQ9NNX9 186 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 VANGL2Q9ULK5 521 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 AK5Q9Y6K8 562 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 COMMD3-BMI1R4GMX3 469 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 ZCWPW2A0A1B0GU75 182 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 IRF6O14896 467 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 DNAJA2O60884 412 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 TKTP29401 623 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 GLUD2P49448 558 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 NDUFV1P49821 464 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 BCAT1P54687 386 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 KIZQ2M2Z5 673 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 LINC01465Q8N7H1 131 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 KBTBD7Q8WVZ9 684 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 RCN3Q96D15 328 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 UNKQ9C0B0 810 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 CHRAC1Q9NRG0 131 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 UBP1Q9NZI7 540 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 STK39Q9UEW8 545 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 APPL1Q9UKG1 709 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 PSMD13Q9UNM6 376 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 NUP205Q92621 2012 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 PRDX6P30041 224 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 AVPR1AP37288 418 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 MS4A2Q01362 244 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 FLOT2Q14254 428 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 PDK1Q15118 436 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 CNGA3Q16281 694 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 ZNF484Q5JVG2 852 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 SYPL2Q5VXT5 272 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 ARHGAP17Q68EM7 881 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 PAOXQ6QHF9 649 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 STRADAQ7RTN6 431 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 CLEC14AQ86T13 490 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 OTUD5Q96G74 571 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 CNBD2Q96M20 576 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 CATSPER2Q96P56 530 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 LRRC40Q9H9A6 602 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 IARS2Q9NSE4 1012 aaKnown RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 SLC39A10Q9ULF5 831 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 SPTLC1O15269 473 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 PEX1O43933 1283 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 ENO3P13929 434 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 ATP6V1B1P15313 513 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 TCN1P20061 433 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 GNL1P36915 607 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 GRM5P41594 1212 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 DPP6P42658 865 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 KCTD2Q14681 263 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 EML3Q32P44 896 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 SLC25A52Q3SY17 297 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 ARMC3Q5W041 872 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 NXNQ6DKJ4 435 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 POTEAQ6S8J7 498 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 IFNLR1Q8IU57 520 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 SPNS2Q8IVW8 549 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 LILRA2Q8N149 483 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 KYQ8NBH2 561 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 DNAJC1Q96KC8 554 aaKnown RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 MPHOSPH6Q99547 160 aaKnown RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 ILKAPQ9H0C8 392 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 TASP1Q9H6P5 420 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 C20orf96Q9NUD7 363 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 SLC4A7Q9Y6M7 1214 aa14.42□□□□□ -0.1
RAPGEF3-218ENST00000548919 M0QYT0 321 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 MATN2O00339 956 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 CLDN5O00501 218 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 PHGDHO43175 533 aaKnown RBP14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 BEST1O76090 585 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 CRTAMO95727 393 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 THRAP10827 490 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 AKAP5P24588 427 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 PTPN3P26045 913 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 GRIA4P48058 902 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 POU5F1BQ06416 359 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 ARHGAP1Q07960 439 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 CEACAM7Q14002 265 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 TTLL4Q14679 1199 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 ARL13AQ5H913 290 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 ARHGAP22Q7Z5H3 698 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 GALNT4Q8N4A0 578 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 RNF169Q8NCN4 708 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 FAM156AQ8NDB6 213 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 BHLHE22Q8NFJ8 381 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 ISL2Q96A47 359 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 MPP4Q96JB8 637 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 BTBD9Q96Q07 612 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 FERMT1Q9BQL6 677 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 OXSMQ9NWU1 459 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 ZDHHC2Q9UIJ5 367 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 PLXNA1Q9UIW2 1896 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 SHROOM3Q8TF72 1996 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 RGSL1A5PLK6 1076 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 KPNA7A9QM74 516 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 ZBTB24O43167 697 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 PIGNO95427 931 aa14.41□□□□□ -0.1
RAPGEF3-218ENST00000548919 ACAT1P24752 427 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms