RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CEP83Q9Y592 693 aa4.4□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3DA0A087WVF3 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3IA0A087WXS9 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3EA0A087X179 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3KA0A087X1G2 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3BA6NDS4 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3FA6NER0 549 aaPredicted RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3LB9A6J9 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 PAPSS2O95340 614 aaPredicted RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 GLUD1P00367 558 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3HP0C7X1 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 GNLYP22749 145 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 KCNJ4P48050 445 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 GLUD2P49448 558 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 PCYT1AP49585 367 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 ENTPD1P49961 510 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 KIF5AQ12840 1032 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 SF3A3Q12874 501 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 GPR18Q14330 331 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 ZNF628Q5EBL2 1059 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 ARL13AQ5H913 290 aaPredicted RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 FNBP1LQ5T0N5 605 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3GQ6DHY5 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3CQ6IPX1 549 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TMEM71Q6P5X7 295 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 Q6ZSV7 163 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TMEM200AQ86VY9 491 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 CCAR1Q8IX12 1150 aaKnown RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 FAM217AQ8IXS0 508 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TBC1D3Q8IZP1 549 aaPredicted RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 FAM185AQ8N0U4 392 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 CADM3Q8N126 398 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 CLIP4Q8N3C7 705 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 TMEM217Q8N7C4 229 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 DEPTORQ8TB45 409 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 ADAMTS14Q8WXS8 1223 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 LMLNQ96KR4 655 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 PRPF18Q99633 342 aaKnown RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 SEZ6LQ9BYH1 1024 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 VPS33BQ9H267 617 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 GEMIN8Q9NWZ8 242 aaKnown RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 ZDHHC7Q9NXF8 308 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 NCKIPSDQ9NZQ3 722 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 MDFICQ9P1T7 246 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 PLEKHB1Q9UF11 243 aaPredicted RBP4.39□□□□□ -1.71
CCDC38-206ENST00000548771 SLC4A4Q9Y6R1 1079 aa4.39□□□□□ -1.71
CCDC38-206ENST00000548771 ASNA1O43681 348 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 KRT10P13645 584 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 ABCB4P21439 1286 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 ZNF569Q5MCW4 686 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 SLC30A9Q6PML9 568 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 PRSS57Q6UWY2 283 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 ZNF367Q7RTV3 350 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 ENDOVQ8N8Q3 282 aaKnown RBP4.38□□□□□ -1.71
CCDC38-206ENST00000548771 EID2BQ96D98 161 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 ZNF419Q96HQ0 510 aaPredicted RBP4.38□□□□□ -1.71
CCDC38-206ENST00000548771 POLDIP3Q9BY77 421 aaKnown RBP4.38□□□□□ -1.71
CCDC38-206ENST00000548771 KLHL31Q9H511 634 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 RMI1Q9H9A7 625 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 ZNF556Q9HAH1 456 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 Q9N2J8 555 aa4.38□□□□□ -1.71
CCDC38-206ENST00000548771 TCRBV7S3A2A0A539 114 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 GOLGA6L3A6NEY3 463 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 AQP12BA6NM10 295 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 SOX30O94993 753 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 HOXB9P17482 250 aaPredicted RBP4.37□□□□□ -1.71
CCDC38-206ENST00000548771 PRPH2P23942 346 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 AKT1P31749 480 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 PDLIM4P50479 330 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 PMS2P54278 862 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 PTK2BQ14289 1009 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 BTBD16Q32M84 506 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 DNTTIP2Q5QJE6 756 aaKnown RBP4.37□□□□□ -1.71
CCDC38-206ENST00000548771 OTUD1Q5VV17 481 aaPredicted RBP4.37□□□□□ -1.71
CCDC38-206ENST00000548771 KIAA1324Q6UXG2 1013 aaKnown RBP4.37□□□□□ -1.71
CCDC38-206ENST00000548771 CUZD1Q86UP6 607 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 IGFN1Q86VF2 1251 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 CAMK1DQ8IU85 385 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 CMASQ8NFW8 434 aaPredicted RBP4.37□□□□□ -1.71
CCDC38-206ENST00000548771 FAM71BQ8TC56 605 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 STYXQ8WUJ0 223 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 DNASE2BQ8WZ79 361 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 TMEM41AQ96HV5 264 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 MYD88Q99836 296 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 HIPK3Q9H422 1215 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 TMEM248Q9NWD8 314 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 PCDHA10Q9Y5I2 948 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 MST1RQ04912 1400 aa4.37□□□□□ -1.71
CCDC38-206ENST00000548771 STMND1H3BQB6 276 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 HEXIM1O94992 359 aaKnown RBP4.36□□□□□ -1.71
CCDC38-206ENST00000548771 ZNF12P17014 697 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 RCAN1P53805 252 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 RRP1P56182 461 aaKnown RBP4.36□□□□□ -1.71
CCDC38-206ENST00000548771 DSC1Q08554 894 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 SPARCL1Q14515 664 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 HNF4GQ14541 408 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 C9orf50Q5SZB4 431 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 IL31Q6EBC2 164 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 C8orf82Q6P1X6 216 aaPredicted RBP4.36□□□□□ -1.71
CCDC38-206ENST00000548771 MTFR2Q6P444 385 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms