RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SPATA20Q8TB22 786 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 GSDMAQ96QA5 445 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 SYNJ2BP-COX16A0A087WUM0 186 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 GOLGA6L3A6NEY3 463 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 F5H5T6 163 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 TRIM38O00635 465 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 PMM2O15305 246 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 PLRG1O43660 514 aaKnown RBP16.96■□□□□ 0.31
SSH1-208ENST00000548522 BRINP1O60477 761 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 INSM1Q01101 510 aaPredicted RBP16.96■□□□□ 0.31
SSH1-208ENST00000548522 GCNT1Q02742 428 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 CNTN1Q12860 1018 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 EIF4EBP2Q13542 120 aaPredicted RBP16.96■□□□□ 0.31
SSH1-208ENST00000548522 RTP5Q14D33 572 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 PROX2Q3B8N5 592 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 MFSD2AQ8NA29 543 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 SLC39A7Q92504 469 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 BTN2A3PQ96KV6 586 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 FCRL3Q96P31 734 aaPredicted RBP16.96■□□□□ 0.31
SSH1-208ENST00000548522 SPAG5Q96R06 1193 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 MYOCQ99972 504 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 SLC4A5Q9BY07 1137 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 ERVMER34-1Q9H9K5 563 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 METTL14Q9HCE5 456 aaKnown RBP16.96■□□□□ 0.31
SSH1-208ENST00000548522 COX16Q9P0S2 106 aa16.96■□□□□ 0.31
SSH1-208ENST00000548522 TENM4Q6N022 2769 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 ARID1BQ8NFD5 2236 aaPredicted RBP16.95■□□□□ 0.3
SSH1-208ENST00000548522 SART1O43290 800 aaKnown RBP16.95■□□□□ 0.3
SSH1-208ENST00000548522 KRT5P13647 590 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 CKMT2P17540 419 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 SLC45A4Q5BKX6 768 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 TTI2Q6NXR4 508 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 Q6ZVU0 165 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 SNIP1Q8TAD8 396 aaKnown RBP16.95■□□□□ 0.3
SSH1-208ENST00000548522 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 ALG14Q96F25 216 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 NRSN2Q9GZP1 204 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 FAM204AQ9H8W3 233 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 POPDC2Q9HBU9 364 aa16.95■□□□□ 0.3
SSH1-208ENST00000548522 A0A1B0GVM2 712 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 TCAF2A6NFQ2 919 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 KCNU1A8MYU2 1149 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 RNF103O00237 685 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 ATXN7O15265 892 aaPredicted RBP16.94■□□□□ 0.3
SSH1-208ENST00000548522 SIGLEC6O43699 453 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 LETM1O95202 739 aaPredicted RBP16.94■□□□□ 0.3
SSH1-208ENST00000548522 CDK4P11802 303 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 PRLRP16471 622 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 TAS2R38P59533 333 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 YWHAZP63104 245 aaKnown RBP16.94■□□□□ 0.3
SSH1-208ENST00000548522 PDCLQ13371 301 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 FBXL22Q6P050 247 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 LRRC69Q6ZNQ3 347 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 BEND5Q7L4P6 421 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 PRPF39Q86UA1 669 aaKnown RBP16.94■□□□□ 0.3
SSH1-208ENST00000548522 SLC25A45Q8N413 288 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 OXR1Q8N573 874 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 KLK6Q92876 244 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 CCDC34Q96HJ3 373 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 INTS2Q9H0H0 1204 aaKnown RBP16.94■□□□□ 0.3
SSH1-208ENST00000548522 FZD3Q9NPG1 666 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 UCKL1Q9NWZ5 548 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 MAN1B1Q9UKM7 699 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 PPM1HQ9ULR3 514 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 CNTN6Q9UQ52 1028 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 CLCA2Q9UQC9 943 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 PCDHB1Q9Y5F3 818 aa16.94■□□□□ 0.3
SSH1-208ENST00000548522 PSMA7O14818 248 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 BNIP3LO60238 219 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 SMC2O95347 1197 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 MYF5P13349 255 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 BMP6P22004 513 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 GLDCP23378 1020 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 ACADSBP45954 432 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 CCDC173Q0VFZ6 552 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 ACCSLQ4AC99 568 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 PCSK4Q6UW60 755 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 TMEM110Q86TL2 294 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 ERICH1Q86X53 443 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 DCBLD1Q8N8Z6 715 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 EHBP1Q8NDI1 1231 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 RFFLQ8WZ73 363 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 OR8D1Q8WZ84 308 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 DDIT4Q9NX09 232 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 OR51B4Q9Y5P0 310 aa16.93■□□□□ 0.3
SSH1-208ENST00000548522 P4HA2O15460 535 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 FFAR2O15552 330 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 RRP8O43159 456 aaKnown RBP16.92■□□□□ 0.3
SSH1-208ENST00000548522 SLC7A4O43246 635 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 THAP12O43422 761 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 ATP9BO43861 1147 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 GRAP2O75791 330 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 CTSLP07711 333 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 ACP1P24666 158 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 NNMTP40261 264 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 PLK1P53350 603 aa16.92■□□□□ 0.3
SSH1-208ENST00000548522 APBA1Q02410 837 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms