RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 USP30Q70CQ3 517 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 ADAT2Q7Z6V5 191 aaKnown RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 C14orf80Q86SX3 495 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 ERICH1Q86X53 443 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 NAXDQ8IW45 347 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 FAM71AQ8IYT1 594 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 STK40Q8N2I9 435 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 PNPLA1Q8N8W4 532 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 KDM1BQ8NB78 822 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 TMEM35BQ8NCS4 154 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 RHBDD1Q8TEB9 315 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 PRMT1Q99873 361 aaKnown RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 PCED1AQ9H1Q7 454 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 TM9SF3Q9HD45 589 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 TM7SF3Q9NS93 570 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 ASNSD1Q9NWL6 643 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 SERGEFQ9UGK8 458 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 KLK13Q9UKR3 277 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 VANGL2Q9ULK5 521 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 WASF3Q9UPY6 502 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 ANKRD6Q9Y2G4 727 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 FNDC3AQ9Y2H6 1198 aaKnown RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 SNX11Q9Y5W9 270 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 SNX10Q9Y5X0 201 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 FHOD1Q9Y613 1164 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 HS3ST4Q9Y661 456 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 MYOFQ9NZM1 2061 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3DA0A087WVF3 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3IA0A087WXS9 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3EA0A087X179 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3KA0A087X1G2 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3FA6NER0 549 aaPredicted RBP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 LRRC72A6NJI9 287 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3LB9A6J9 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 GOLGA8SH3BPF8 625 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 BNIP3LO60238 219 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 PAGE1O75459 146 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 WFS1O76024 890 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 ADCY5O95622 1261 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 CER1O95813 267 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 IGHV4-34P06331 123 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3HP0C7X1 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SNRPBP14678 240 aaKnown RBP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 CYP11B1P15538 503 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 ZNF18P17022 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TFE3P19532 575 aaPredicted RBP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 NOS2P35228 1153 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SULT1E1P49888 294 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 IRAK1P51617 712 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 OXCT1P55809 520 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SULT2A1Q06520 285 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SLC12A1Q13621 1099 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 ARID5BQ14865 1188 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SUZ12Q15022 739 aaKnown RBP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 POM121L1PQ3SYA9 428 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 C2CD6Q53TS8 623 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TCP11X2Q5H9J9 407 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 KCNT1Q5JUK3 1230 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TTC39BQ5VTQ0 682 aaPredicted RBP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3GQ6DHY5 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3CQ6IPX1 549 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 DPY19L2P1Q6NXN4 242 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 NCEH1Q6PIU2 408 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SLC26A9Q7LBE3 791 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 PHLDB2Q86SQ0 1253 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 NOP9Q86U38 636 aaKnown RBP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TBC1D3Q8IZP1 549 aaPredicted RBP6.9□□□□□ -1.3
SCAF11-211ENST00000547950 AADATQ8N5Z0 425 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 OR14C36Q8NHC7 312 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 CPA5Q8WXQ8 436 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 PTPRN2Q92932 1015 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 C18orf8Q96DM3 657 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 PPP1R9BQ96SB3 815 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 NPY6RQ99463 290 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 FEM1AQ9BSK4 669 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 STK33Q9BYT3 514 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TKTL2Q9H0I9 626 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 MUC3BQ9H195 1237 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 VPS16Q9H269 839 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 WDCPQ9H6R7 721 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 PIGVQ9NUD9 493 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 TAB2Q9NYJ8 693 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 VPS28Q9UK41 221 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 ZMIZ1Q9ULJ6 1067 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 SCML1Q9UN30 329 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 NEUROG3Q9Y4Z2 214 aa6.9□□□□□ -1.3
SCAF11-211ENST00000547950 ACACBO00763 2458 aa6.9□□□□□ -1.31
SCAF11-211ENST00000547950 EPG5Q9HCE0 2579 aa6.9□□□□□ -1.31
SCAF11-211ENST00000547950 A0A1B0GVM2 712 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 TCAF2A6NFQ2 919 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 H0Y8X5 98 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 PLK4O00444 970 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 SRGAP2O75044 1071 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 CLDN11O75508 207 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 DAB1O75553 588 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 CNTN5O94779 1100 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 GFPT2O94808 682 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms