RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 GABBR2O75899 941 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 BEST1O76090 585 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 MCF2P10911 925 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 CYLC2Q14093 348 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 CSHL1Q14406 222 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 KRT80Q6KB66 452 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 TMC7Q7Z402 723 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 MFN1Q8IWA4 741 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 ZFP42Q96MM3 310 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 LIN28AQ9H9Z2 209 aaKnown RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 F8W8V4 182 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 UQCRBP14927 111 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 PIK3R1P27986 724 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 NMBRP28336 390 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 BST2Q10589 180 aaKnown RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 GRM3Q14832 879 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 SLC5A9Q2M3M2 681 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 FBXO47Q5MNV8 452 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 LRRC8EQ6NSJ5 796 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 RNF111Q6ZNA4 994 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 ARMCX2Q7L311 632 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 LDB1Q86U70 411 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 FBXW8Q8N3Y1 598 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 OR6P1Q8NGX9 317 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 FTHL17Q9BXU8 183 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 ACE2Q9BYF1 805 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 RHOBTB2Q9BYZ6 727 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 RPL26L1Q9UNX3 145 aaKnown RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 COL4A5P29400 1685 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 KIF3CO14782 793 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 DNAJA2O60884 412 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 USP2O75604 605 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 JUNP05412 331 aaKnown RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 GRK2P25098 689 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 GHRHRQ02643 423 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 LSM12Q3MHD2 195 aaKnown RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 RARS2Q5T160 578 aaKnown RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 SLC9A4Q6AI14 798 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 BNC2Q6ZN30 1099 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 GK5Q6ZS86 529 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 ARCQ7LC44 396 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 KYQ8NBH2 561 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 VPS39Q96JC1 886 aa13.25□□□□□ -0.29
BRF1-210ENST00000547374 FRMD8Q9BZ67 464 aaPredicted RBP13.25□□□□□ -0.29
BRF1-210ENST00000547374 HNRNPRO43390 633 aaKnown RBP13.24□□□□□ -0.29
BRF1-210ENST00000547374 C22orf31O95567 290 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SPATA31D3P0C874 917 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 ATICP31939 592 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 MPP1Q00013 466 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 PLIN5Q00G26 463 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 MAP3K10Q02779 954 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SPATA31D4Q6ZUB0 917 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 DSELQ8IZU8 1212 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 LRRC39Q96DD0 335 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SERPINI1Q99574 410 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SLC39A3Q9BRY0 314 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SPATA16Q9BXB7 569 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 ULBP1Q9BZM6 244 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 LRRC40Q9H9A6 602 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 ITGA11Q9UKX5 1188 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 GOLGA4Q13439 2230 aaKnown RBP13.24□□□□□ -0.29
BRF1-210ENST00000547374 KLF11O14901 512 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 BIRC5O15392 142 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 TSPAN1O60635 241 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 GCATO75600 419 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 CTSHP09668 335 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 CDK7P50613 346 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 BCAT1P54687 386 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SLC12A1Q13621 1099 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 WSCD1Q658N2 575 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SLC35F5Q8WV83 523 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 DCUN1D1Q96GG9 259 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SORT1Q99523 831 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 MRPL1Q9BYD6 325 aaKnown RBP13.24□□□□□ -0.29
BRF1-210ENST00000547374 UBE2OQ9C0C9 1292 aaKnown RBP13.24□□□□□ -0.29
BRF1-210ENST00000547374 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SNNO75324 88 aaPredicted RBP13.24□□□□□ -0.29
BRF1-210ENST00000547374 CPOXP36551 454 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 FDFT1P37268 417 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 SERPINB8P50452 374 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 PDAP1Q13442 181 aaKnown RBP13.24□□□□□ -0.29
BRF1-210ENST00000547374 NOMO2Q5JPE7 1267 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 DNAJB3Q8WWF6 145 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 KHSRPQ92945 711 aaKnown RBP eCLIP13.24□□□□□ -0.29
BRF1-210ENST00000547374 ZBED3Q96IU2 234 aaPredicted RBP13.24□□□□□ -0.29
BRF1-210ENST00000547374 GORASP1Q9BQQ3 440 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 TRIM8Q9BZR9 551 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 PLEKHA5Q9HAU0 1116 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 XPR1Q9UBH6 696 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 STAP1Q9ULZ2 295 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 LZTS1Q9Y250 596 aa13.24□□□□□ -0.29
BRF1-210ENST00000547374 AP4B1Q9Y6B7 739 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms