RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TM7SF3Q9NS93 570 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 SNX11Q9Y5W9 270 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 IGF2RP11717 2491 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 FAM47DPA6NHR8 397 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 GOLGA8SH3BPF8 625 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 CLDN11O75508 207 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 ADH1BP00325 375 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 DRD3P35462 400 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 VASPP50552 380 aaPredicted RBP21.72■■□□□ 1.07
SCARB1-210ENST00000545493 GALCP54803 685 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 ADPRHP54922 357 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 CDH4P55283 916 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 OXCT1P55809 520 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 HNRNPDQ14103 355 aaKnown RBP21.72■■□□□ 1.07
SCARB1-210ENST00000545493 SLC25A52Q3SY17 297 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 NAA35Q5VZE5 725 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 BAHD1Q8TBE0 780 aaPredicted RBP21.72■■□□□ 1.07
SCARB1-210ENST00000545493 GATA6Q92908 595 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 SLC6A18Q96N87 628 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 FEM1AQ9BSK4 669 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 SIK2Q9H0K1 926 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 TMEM59LQ9UK28 342 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 KLK13Q9UKR3 277 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 PCOLCE2Q9UKZ9 415 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 TBC1D30Q9Y2I9 924 aa21.72■■□□□ 1.07
SCARB1-210ENST00000545493 DOCK4Q8N1I0 1966 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 A0A1W2PPC4 97 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 ATP9BO43861 1147 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 GFPT2O94808 682 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 PROS1P07225 676 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 FMO1Q01740 532 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 DEUP1Q05D60 604 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 KCNT1Q5JUK3 1230 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 OR2T34Q8NGX1 318 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 CPA5Q8WXQ8 436 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 FAM131CQ96AQ9 280 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 SPAG5Q96R06 1193 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 PSMB7Q99436 277 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 OMDQ99983 421 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 WDCPQ9H6R7 721 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 METTL5Q9NRN9 209 aaKnown RBP21.71■■□□□ 1.07
SCARB1-210ENST00000545493 FAM207AQ9NSI2 230 aaPredicted RBP21.71■■□□□ 1.07
SCARB1-210ENST00000545493 SLC25A13Q9UJS0 675 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 VPS28Q9UK41 221 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 ANKRD6Q9Y2G4 727 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 SIK3Q9Y2K2 1263 aa21.71■■□□□ 1.07
SCARB1-210ENST00000545493 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.7■■□□□ 1.06
SCARB1-210ENST00000545493 IL1BP01584 269 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 CYP1A1P04798 512 aaPredicted RBP21.7■■□□□ 1.06
SCARB1-210ENST00000545493 C5AR1P21730 350 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 NNMTP40261 264 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 POLR2FP61218 127 aaKnown RBP21.7■■□□□ 1.06
SCARB1-210ENST00000545493 PPP2CBP62714 309 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 PPP2CAP67775 309 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 ZNF177Q13360 481 aaPredicted RBP21.7■■□□□ 1.06
SCARB1-210ENST00000545493 TEAD4Q15561 434 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 TRIP6Q15654 476 aaKnown RBP21.7■■□□□ 1.06
SCARB1-210ENST00000545493 Q6ZVU0 165 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 SND1Q7KZF4 910 aaKnown RBP eCLIP21.7■■□□□ 1.063e-10■■□□□ 12.9
SCARB1-210ENST00000545493 ZNF677Q86XU0 584 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 SH2D3CQ8N5H7 860 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 CFAP57Q96MR6 1250 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 GBP4Q96PP9 640 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 FANCLQ9NW38 375 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 SARDHQ9UL12 918 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 NEUROG3Q9Y4Z2 214 aa21.7■■□□□ 1.06
SCARB1-210ENST00000545493 LRRC72A6NJI9 287 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 PLK4O00444 970 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 RHOCP08134 193 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 FTH1P19P0C7X4 201 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 GOT1P17174 413 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 CHRNB2P17787 502 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 RDXP35241 583 aaKnown RBP21.69■■□□□ 1.06
SCARB1-210ENST00000545493 CTSKP43235 329 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 CDR2Q01850 454 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 SFSWAPQ12872 951 aaKnown RBP21.69■■□□□ 1.06
SCARB1-210ENST00000545493 RAB44Q7Z6P3 723 aaPredicted RBP21.69■■□□□ 1.06
SCARB1-210ENST00000545493 EMC1Q8N766 993 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 MSANTD4Q8NCY6 345 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 MUC3BQ9H195 1237 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 NLRC4Q9NPP4 1024 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 BTBD3Q9Y2F9 522 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 PCDHGB2Q9Y5G2 931 aa21.69■■□□□ 1.06
SCARB1-210ENST00000545493 IGLV3-10A0A075B6K4 115 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 DRGXA6NNA5 263 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 SNAP91O60641 907 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 TRIM16O95361 564 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 WNT1P04628 370 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 SRCP12931 536 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 SOX5P35711 763 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 COPB1P53618 953 aaKnown RBP21.68■■□□□ 1.06
SCARB1-210ENST00000545493 RACK1P63244 317 aaKnown RBP21.68■■□□□ 1.06
SCARB1-210ENST00000545493 ZNF423Q2M1K9 1284 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 RAB6CQ53S08 254 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 DBX2Q6ZNG2 339 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 TFAP2DQ7Z6R9 452 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 FAM131BQ86XD5 332 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 OR14C36Q8NHC7 312 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 OR8D1Q8WZ84 308 aa21.68■■□□□ 1.06
SCARB1-210ENST00000545493 RAB6CQ9H0N0 254 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms