RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	PNKP	Q96T60	521 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	SH2D3A	Q9BRG2	576 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	PYM1	Q9BRP8	204 aa	Known RBP	7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	SGPP1	Q9BX95	441 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	AKTIP	Q9H8T0	292 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	TM9SF3	Q9HD45	589 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	ENAM	Q9NRM1	1142 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	GFOD1	Q9NXC2	390 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	SUCLA2	Q9P2R7	463 aa	Predicted RBP	7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	RCOR1	Q9UKL0	485 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	PCDHA12	Q9UN75	941 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	PCDHB6	Q9Y5E3	794 aa		7.12	□□□□□ -1.27
LDHA-223	ENST00000545215	PKD1L1	Q8TDX9	2849 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	TCRBV16S1A1N1	A0A5B0	115 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	MYMK	A6NI61	221 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215		I3L4J1	428 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	SPTLC2	O15270	562 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	TSPAN3	O60637	253 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	B3GAT3	O94766	335 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	VNN2	O95498	520 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	APOD	P05090	189 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	TH	P07101	528 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	SNRPB2	P08579	225 aa	Known RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	THEGL	P0DJG4	465 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	HOXB2	P14652	356 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	WT1	P19544	449 aa	Predicted RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	PTMS	P20962	102 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	MUT	P22033	750 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	CDC25C	P30307	473 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	AXL	P30530	894 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	IGFALS	P35858	605 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	TNFSF9	P41273	254 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	ALDH1A3	P47895	512 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	IFNAR2	P48551	515 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	EPHB1	P54762	984 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	PSMC5	P62195	406 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	STRN3	Q13033	797 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	PPP2R5C	Q13362	524 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	ZNF268	Q14587	947 aa	Predicted RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	MTF1	Q14872	753 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	ISX	Q2M1V0	245 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	PRAMEF14	Q5SWL7	426 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	HAUS3	Q68CZ6	603 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	DENND5A	Q6IQ26	1287 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	NOTUM	Q6P988	496 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	B3GNT9	Q6UX72	402 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	LHFPL2	Q6ZUX7	228 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	MAB21L3	Q8N8X9	362 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	BEST2	Q8NFU1	509 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	CCDC51	Q96ER9	411 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	FAM46A	Q96IP4	442 aa	Known RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	USP28	Q96RU2	1077 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	ELF4	Q99607	663 aa	Predicted RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	JPH2	Q9BR39	696 aa	Predicted RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	CEP41	Q9BYV8	373 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	ASPSCR1	Q9BZE9	553 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	LINC00597	Q9H2U6	94 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	TTC12	Q9H892	705 aa	Predicted RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	PTPRH	Q9HD43	1115 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	ITM2C	Q9NQX7	267 aa		7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	SRPRB	Q9Y5M8	271 aa	Known RBP	7.11	□□□□□ -1.27
LDHA-223	ENST00000545215	PMS2P1	A4D2B8	440 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	GOLGA6L4	A6NEF3	574 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	PTGES	O14684	152 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	GPR39	O43194	453 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	SART1	O43290	800 aa	Known RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	SLC37A4	O43826	429 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	CUTA	O60888	179 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	KATNA1	O75449	491 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	TNFSF15	O95150	251 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	STBD1	O95210	358 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	RASGRP1	O95267	797 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	CP	P00450	1065 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	RARG	P13631	454 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	NTSR1	P30989	418 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	TXK	P42681	527 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	BRCC3	P46736	316 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	QARS	P47897	775 aa	Known RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	SLC6A11	P48066	632 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	EPHA7	Q15375	998 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	NFE2	Q16621	373 aa	Predicted RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	PRSS53	Q2L4Q9	553 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	PRRT3	Q5FWE3	981 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	PLA2G4F	Q68DD2	849 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	LAYN	Q6UX15	382 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	TMC3	Q7Z5M5	1100 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	C14orf80	Q86SX3	495 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	XYLT1	Q86Y38	959 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	C4orf32	Q8N8J7	132 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	IGSF22	Q8N9C0	903 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	FBLIM1	Q8WUP2	373 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	HAS1	Q92839	578 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	MAGEB10	Q96LZ2	347 aa	Predicted RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	SLC6A17	Q9H1V8	727 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	USP36	Q9P275	1121 aa	Known RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	ACSL6	Q9UKU0	697 aa		7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	GPR55	Q9Y2T6	319 aa	Predicted RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	SF3B6	Q9Y3B4	125 aa	Known RBP	7.1	□□□□□ -1.27
LDHA-223	ENST00000545215	CLIC4	Q9Y696	253 aa		7.1	□□□□□ -1.27

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