RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 FOXR1Q6PIV2 292 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 CRTC1Q6UUV9 634 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 ZNF574Q6ZN55 896 aaPredicted RBP9.7□□□□□ -0.86
CHD4-212ENST00000545083 ATG14Q6ZNE5 492 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 CLEC14AQ86T13 490 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 GRAMD1CQ8IYS0 662 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 SLC22A18ASQ8N1D0 253 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 IQUBQ8NA54 791 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 LINC00301Q8NCQ3 95 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 UBA3Q8TBC4 463 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 FRS2Q8WU20 508 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
CHD4-212ENST00000545083 CCNL2Q96S94 520 aaPredicted RBP9.7□□□□□ -0.86
CHD4-212ENST00000545083 CALN1Q9BXU9 219 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 MMRN2Q9H8L6 949 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 LRRC4Q9HBW1 653 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 NLGN3Q9NZ94 848 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 XPO7Q9UIA9 1087 aaKnown RBP9.7□□□□□ -0.86
CHD4-212ENST00000545083 TSPAN16Q9UKR8 245 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 NYNRINQ9P2P1 1898 aaKnown RBP9.7□□□□□ -0.86
CHD4-212ENST00000545083 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 CPED1A4D0V7 1026 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 PIK3R2O00459 728 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 PDXKO00764 312 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 SCAMP1O15126 338 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 TNFSF15O95150 251 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 LUC7L3O95232 432 aaKnown RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 FAM87AP0C7U9 286 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 ALPPL2P10696 532 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 SYT1P21579 422 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 AFMP43652 599 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 RP1P56715 2156 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 CLDN2P57739 230 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 BST2Q10589 180 aaKnown RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 ZNF177Q13360 481 aaPredicted RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 DRAP1Q14919 205 aaPredicted RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 STK38Q15208 465 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 TGIF1Q15583 401 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 CDKN3Q16667 212 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 C8orf34Q49A92 452 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 KMT5BQ4FZB7 885 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 SGO2Q562F6 1265 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 RNF219Q5W0B1 726 aaPredicted RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 GCNT7Q6ZNI0 430 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 EFL1Q7Z2Z2 1120 aaKnown RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 UNC45BQ8IWX7 931 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 AZIN2Q96A70 460 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 CCDC97Q96F63 343 aaPredicted RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 FCRL2Q96LA5 508 aaPredicted RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 SPAG5Q96R06 1193 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 USP29Q9HBJ7 922 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 ATXN7L1Q9ULK2 861 aaPredicted RBP9.69□□□□□ -0.86
CHD4-212ENST00000545083 CEP83Q9Y592 693 aa9.69□□□□□ -0.86
CHD4-212ENST00000545083 UTP20O75691 2785 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 A0A1W2PQU0 124 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 TYW5A2RUC4 315 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 SPTLC2O15270 562 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 POLR2DO15514 142 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 NOBOXO60393 691 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 MOCS3O95396 460 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 AFPP02771 609 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 GP1BBP13224 206 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 PDIA4P13667 645 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 LCP1P13796 627 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 DUSP3P51452 185 aaPredicted RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 SLC8A3P57103 927 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 C1QBPQ07021 282 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 ZNF284Q2VY69 593 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 PERM1Q5SV97 790 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 PIP5KL1Q5T9C9 394 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 OR6B2Q6IFH4 312 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 RBM44Q6ZP01 1051 aaKnown RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 SIX6OS1Q8N1H7 587 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 SCML4Q8N228 414 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 ZNF548Q8NEK5 533 aaPredicted RBP9.68□□□□□ -0.86
CHD4-212ENST00000545083 CLEC4CQ8WTT0 213 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 KCTD13Q8WZ19 329 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 SLC39A13Q96H72 371 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 CNGB3Q9NQW8 809 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 PPM1HQ9ULR3 514 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 MTMR6Q9Y217 621 aa9.68□□□□□ -0.86
CHD4-212ENST00000545083 EME2A4GXA9 379 aaPredicted RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 NEMP2A6NFY4 417 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 RNF103O00237 685 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 MAPK13O15264 365 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 PPP6R2O75170 966 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 MOCS2O96007 188 aaPredicted RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 LTFP02788 710 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 FYNP06241 537 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 ITGA2BP08514 1039 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 PDGFRAP16234 1089 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 RGS7P49802 495 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 TLE1Q04724 770 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 CUL4AQ13619 759 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 FZD2Q14332 565 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 ZCCHC8Q6NZY4 707 aaKnown RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 PMF1Q6P1K2 205 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms