RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 SLC26A11Q86WA9 606 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 DAW1Q8N136 415 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 ANXA6P08133 673 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 NDST1P52848 882 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 C3orf67Q6ZVT6 689 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 GRIP2Q9C0E4 1043 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 PAIP1Q9H074 479 aaKnown RBP20.36■□□□□ 0.85
BPTF-208ENST00000544778 MCUBQ9NWR8 336 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 ARP10275 920 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 LGALS3BPQ08380 585 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 ZNF470Q6ECI4 717 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 ZNF248Q8NDW4 579 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 ABCG4Q9H172 646 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 REEP1Q9H902 201 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 FAM50BQ9Y247 325 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 DGUOKQ16854 277 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 FERD3LQ96RJ6 166 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 DCUN1D5Q9BTE7 237 aa20.36■□□□□ 0.85
BPTF-208ENST00000544778 UBA2Q9UBT2 640 aaPredicted RBP20.36■□□□□ 0.85
BPTF-208ENST00000544778 TRIM3O75382 744 aaPredicted RBP20.35■□□□□ 0.85
BPTF-208ENST00000544778 LDLRP01130 860 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 PDHA2P29803 388 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 ERO1BQ86YB8 467 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 ARMC8Q8IUR7 673 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 PSME2Q9UL46 239 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 KPNA5O15131 536 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 ADCY6O43306 1168 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 OMPP47874 163 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 PJA1Q8NG27 643 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 OR10G6Q8NH81 332 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 PABPC3Q9H361 631 aaKnown RBP20.35■□□□□ 0.85
BPTF-208ENST00000544778 CD3EAPO15446 510 aaKnown RBP20.35■□□□□ 0.85
BPTF-208ENST00000544778 RPA3P35244 121 aaPredicted RBP20.35■□□□□ 0.85
BPTF-208ENST00000544778 IRAK1P51617 712 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 TSPAN16Q9UKR8 245 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 BTBD3Q9Y2F9 522 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 PRKAB1Q9Y478 270 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 HNF4AP41235 474 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 SCUBE3Q8IX30 993 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 ANXA5P08758 320 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 BACE1P56817 501 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 SETD9Q8NE22 299 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 TNKS2Q9H2K2 1166 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 TRIM17Q9Y577 477 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 PDHXO00330 501 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 ATP9AO75110 1047 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 IL1R1P14778 569 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 STXBP1P61764 594 aaKnown RBP20.35■□□□□ 0.85
BPTF-208ENST00000544778 CYP4F2P78329 520 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 CYP4F3Q08477 520 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 CDH17Q12864 832 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 STARD8Q92502 1023 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 DSN1Q9H410 356 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 EFR3BQ9Y2G0 817 aa20.35■□□□□ 0.85
BPTF-208ENST00000544778 MED24O75448 989 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 NTRK1P04629 796 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 BDNFP23560 247 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 STARP49675 285 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 PFKPQ01813 784 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 GRB14Q14449 540 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 EML3Q32P44 896 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 GDPD5Q8WTR4 605 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 CPNE1Q99829 537 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 FAM126AQ9BYI3 521 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 ABHD14A-ACY1A0A1B0GW23 586 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 KPNA4O00629 521 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 FARP2O94887 1054 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 ATG9AQ7Z3C6 839 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 ATP8B4Q8TF62 1192 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 PIGKQ92643 395 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 TEKT5Q96M29 485 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 TMEM237Q96Q45 408 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 CDC42EP4Q9H3Q1 356 aaKnown RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 EPB41L4AQ9HCS5 686 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 MRPL17Q9NRX2 175 aaKnown RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 EHD3Q9NZN3 535 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 SGTAO43765 313 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 PTPN11Q06124 597 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 CYB5D1Q6P9G0 228 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 ALKBH4Q9NXW9 302 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 RPLP2P05387 115 aaKnown RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 RNF148Q8N7C7 305 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 MARK1Q9P0L2 795 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 VAPBO95292 243 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 ETS1P14921 441 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 CAP2P40123 477 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 MFSD10Q14728 455 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 LIN54Q6MZP7 749 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 TINF2Q9BSI4 451 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 TRAV19A0A0A6YYK7 116 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 PNMA8CA0A1B0GUJ8 204 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 AMPD1P23109 780 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 RRM1P23921 792 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 STAT5AP42229 794 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 QRFPRQ96P65 431 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 PCDH12Q9NPG4 1184 aa20.34■□□□□ 0.85
BPTF-208ENST00000544778 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 BARX2Q9UMQ3 279 aaPredicted RBP20.34■□□□□ 0.85
BPTF-208ENST00000544778 SCAMP3O14828 347 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms