RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 POU5F1Q01860 360 aaKnown RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 CYP27A1Q02318 531 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 TLE1Q04724 770 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ZBTB16Q05516 673 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 GOLGA8FQ08AF8 430 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 GOLGA8DPQ0D2H9 430 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ST3GAL1Q11201 340 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ORC2Q13416 577 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 TCEAL1Q15170 157 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 LONRF2Q1L5Z9 754 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ARL13BQ3SXY8 428 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 HS1BP3Q53T59 392 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 SLC45A4Q5BKX6 768 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 KIAA1614Q5VZ46 1190 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 JADE1Q6IE81 842 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 KDM7AQ6ZMT4 941 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ZNF765Q7L2R6 523 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 GATAD2AQ86YP4 633 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 EID2Q8N6I1 236 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 NSUN7Q8NE18 718 aaKnown RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 SAP25Q8TEE9 199 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 OVCA2Q8WZ82 227 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 HPS3Q969F9 1004 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ZNF274Q96GC6 653 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 RCC1LQ96I51 464 aaKnown RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 VCPIP1Q96JH7 1222 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 JAKMIP1Q96N16 626 aaKnown RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ACOX2Q99424 681 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 SPATA9Q9BWV2 254 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 TTLL2Q9BWV7 592 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 PRDM14Q9GZV8 571 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 BTBD1Q9H0C5 482 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 RNF38Q9H0F5 515 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 POLR1BQ9H9Y6 1135 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 SGK2Q9HBY8 427 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 LRRC4CQ9HCJ2 640 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 GDF3Q9NR23 364 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 DPP3Q9NY33 737 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 WHRNQ9P202 907 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 MAGEC2Q9UBF1 373 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 APEX2Q9UBZ4 518 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 PFDN2Q9UHV9 154 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 GTF3C4Q9UKN8 822 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 RNF112Q9ULX5 631 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 SRPK3Q9UPE1 567 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 DNM3Q9UQ16 869 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 MAN2B2Q9Y2E5 1009 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 STON1Q9Y6Q2 735 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 TENM4Q6N022 2769 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 PCNX2A6NKB5 2137 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 PTPRBP23467 1997 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 URB1O60287 2271 aaKnown RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 LAMA1P25391 3075 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 ABCA7Q8IZY2 2146 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 A0A1W2PQU0 124 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 CLEC18AA5D8T8 446 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 PRRT4C9JH25 899 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 KCNK3O14649 394 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 HNRNPDLO14979 420 aaKnown RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 TSPAN3O60637 253 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 USP12O75317 370 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 PPM1BO75688 479 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 FSBPO95073 299 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 SEMA4FO95754 770 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 FAM153BP0C7A2 387 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 PLS3P13797 630 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 TYRP14679 529 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 CPA1P15085 419 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 EPHA8P29322 1005 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 CCT6AP40227 531 aaKnown RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 TUBP50607 506 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 ZNF445P59923 1031 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 TAF10Q12962 218 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 SQSTM1Q13501 440 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 ENPP2Q13822 863 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 EIF4HQ15056 248 aaKnown RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 TTC31Q49AM3 519 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 EARS2Q5JPH6 523 aaKnown RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 HECTD3Q5T447 861 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 CLEC18BQ6UXF7 455 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 TMEM25Q86YD3 366 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 BBS7Q8IWZ6 715 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 PDCL2Q8N4E4 241 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 EXD3Q8N9H8 876 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 CLEC18CQ8NCF0 446 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 TMEM161BQ8NDZ6 487 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 OR2T3Q8NH03 318 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 PIWIL2Q8TC59 973 aaKnown RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 KCNN1Q92952 543 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 BIRC7Q96CA5 298 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 ERLEC1Q96DZ1 483 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 C8orf48Q96LL4 319 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 AIFM3Q96NN9 605 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 CCNL2Q96S94 520 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-220ENST00000544550 PKMYT1Q99640 499 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 MSTO1Q9BUK6 570 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 BBS2Q9BXC9 721 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 RAB34Q9BZG1 259 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 NACA2Q9H009 215 aa4.3□□□□□ -1.72
SNHG1-220ENST00000544550 LHX5Q9H2C1 402 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms