RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TCRBV21S2A2A0A5A6 115 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 AXIN1O15169 862 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 FGF10O15520 208 aaPredicted RBP19.61■□□□□ 0.73
DDX55-211ENST00000544429 HRO43593 1189 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 ZMPSTE24O75844 475 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 RARAP10276 462 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 HLA-EP13747 358 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 EPHB2P29323 1055 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 ARHGAP25P42331 645 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 COPAP53621 1224 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 GNA12Q03113 381 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 HNRNPA1L2Q32P51 320 aaKnown RBP19.61■□□□□ 0.73
DDX55-211ENST00000544429 FNDC3BQ53EP0 1204 aaKnown RBP19.61■□□□□ 0.73
DDX55-211ENST00000544429 HEATR6Q6AI08 1181 aaKnown RBP19.61■□□□□ 0.73
DDX55-211ENST00000544429 ANO7Q6IWH7 933 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 RWDD4Q6NW29 188 aaKnown RBP19.61■□□□□ 0.73
DDX55-211ENST00000544429 FRS2Q8WU20 508 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 ATRIPQ8WXE1 791 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 MRGPRX1Q96LB2 322 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 MKRN2Q9H000 416 aaKnown RBP19.61■□□□□ 0.73
DDX55-211ENST00000544429 EPC1Q9H2F5 836 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 SEMA4AQ9H3S1 761 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 DHX35Q9H5Z1 703 aaKnown RBP19.61■□□□□ 0.73
DDX55-211ENST00000544429 GRPEL1Q9HAV7 217 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 SLCO3A1Q9UIG8 710 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 VPS28Q9UK41 221 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 HS3ST2Q9Y278 367 aa19.61■□□□□ 0.73
DDX55-211ENST00000544429 A0A0A6YYK5 440 aaPredicted RBP19.6■□□□□ 0.73
DDX55-211ENST00000544429 ATP9BO43861 1147 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 CREB3O43889 395 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 ALDH1A2O94788 518 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 EPHX1P07099 455 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 NDUFV2P19404 249 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 STK19P49842 368 aaPredicted RBP19.6■□□□□ 0.73
DDX55-211ENST00000544429 ARSEP51690 589 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 DPYSQ14117 519 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 KCNT1Q5JUK3 1230 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 UMODL1-AS1Q8N2C9 162 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 SUMF1Q8NBK3 374 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 OR7D4Q8NG98 312 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 TSC1Q92574 1164 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 RPL10LQ96L21 214 aaKnown RBP19.6■□□□□ 0.73
DDX55-211ENST00000544429 C2orf49Q9BVC5 232 aaPredicted RBP19.6■□□□□ 0.73
DDX55-211ENST00000544429 KLC2Q9H0B6 622 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 MUC3BQ9H195 1237 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 MAGEH1Q9H213 219 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 PRSS16Q9NQE7 514 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 VPS51Q9UID3 782 aa19.6■□□□□ 0.73
DDX55-211ENST00000544429 GPR179Q6PRD1 2367 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 OTOGLQ3ZCN5 2332 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 RCCD1A6NED2 376 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 SNAP91O60641 907 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 GSDMDP57764 484 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 TAS2R40P59535 323 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 TPI1P60174 286 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 STARD3Q14849 445 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 SPA17Q15506 151 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 SMTNL2Q2TAL5 461 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 RFX8Q6ZV50 586 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 POLNQ7Z5Q5 900 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 METTL3Q86U44 580 aaKnown RBP19.59■□□□□ 0.73
DDX55-211ENST00000544429 ZNF366Q8N895 744 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 HMGB4Q8WW32 186 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 GAB3Q8WWW8 586 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 ARHGEF2Q92974 986 aaKnown RBP19.59■□□□□ 0.73
DDX55-211ENST00000544429 CATSPERBQ9H7T0 1116 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 FBRSQ9HAH7 460 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 CWC15Q9P013 229 aaKnown RBP19.59■□□□□ 0.73
DDX55-211ENST00000544429 SUN2Q9UH99 717 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 DNAI1Q9UI46 699 aa19.59■□□□□ 0.73
DDX55-211ENST00000544429 TARSL2A2RTX5 802 aaKnown RBP19.58■□□□□ 0.72
DDX55-211ENST00000544429 TTC34A8MYJ7 566 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 SYNCRIPO60506 623 aaKnown RBP19.58■□□□□ 0.72
DDX55-211ENST00000544429 GOT1P17174 413 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 ACVRL1P37023 503 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 ETFBP38117 255 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 NUMBP49757 651 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 ST8SIA6P61647 398 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 KRT83P78385 493 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 ARF5P84085 180 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 SRSF5Q13243 272 aaKnown RBP19.58■□□□□ 0.72
DDX55-211ENST00000544429 C9orf64Q5T6V5 341 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 AFMIDQ63HM1 303 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 SH2D3CQ8N5H7 860 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 OR2T3Q8NH03 318 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 PTPRN2Q92932 1015 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 TPSD1Q9BZJ3 242 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 MTG2Q9H4K7 406 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 LRRC19Q9H756 370 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 ZWILCHQ9H900 591 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.58■□□□□ 0.72
DDX55-211ENST00000544429 TFR2Q9UP52 801 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 ABCA7Q8IZY2 2146 aa19.58■□□□□ 0.72
DDX55-211ENST00000544429 FRYLO94915 3013 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 BTNL10A8MVZ5 291 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 EEF2KO00418 725 aaKnown RBP19.57■□□□□ 0.72
DDX55-211ENST00000544429 PJA2O43164 708 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 RAMP2O60895 175 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 CD160O95971 181 aa19.57■□□□□ 0.72
DDX55-211ENST00000544429 MT-CO1P00395 513 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms