RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 LRRC40Q9H9A6 602 aa16.4■□□□□ 0.22
SPDEF-202ENST00000544425 SPG21Q9NZD8 308 aa16.4■□□□□ 0.22
SPDEF-202ENST00000544425 DNMT3LQ9UJW3 386 aa16.4■□□□□ 0.22
SPDEF-202ENST00000544425 MAFFQ9ULX9 164 aa16.4■□□□□ 0.22
SPDEF-202ENST00000544425 MAGED2Q9UNF1 606 aaPredicted RBP16.4■□□□□ 0.22
SPDEF-202ENST00000544425 AAR2Q9Y312 384 aaKnown RBP16.4■□□□□ 0.22
SPDEF-202ENST00000544425 CXorf49A8MYA2 514 aaPredicted RBP16.39■□□□□ 0.22
SPDEF-202ENST00000544425 BAIAP3O94812 1187 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 SEC24AO95486 1093 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 ASMTLO95671 621 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 MT-ND3P03897 115 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 ATP5C1P36542 298 aaKnown RBP16.39■□□□□ 0.22
SPDEF-202ENST00000544425 NPY2RP49146 381 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 PAPOLAP51003 745 aaKnown RBP16.39■□□□□ 0.22
SPDEF-202ENST00000544425 SESN2P58004 480 aaPredicted RBP16.39■□□□□ 0.22
SPDEF-202ENST00000544425 RAB33AQ14088 237 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 FBXL22Q6P050 247 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 CTAGE3PQ8IX95 158 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 C4orf33Q8N1A6 199 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 TMEM199Q8N511 208 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 PPM1NQ8N819 430 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 MGARPQ8TDB4 240 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 OXNAD1Q96HP4 312 aaPredicted RBP16.39■□□□□ 0.22
SPDEF-202ENST00000544425 MAGEB18Q96M61 343 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 NOL6Q9H6R4 1146 aaKnown RBP16.39■□□□□ 0.22
SPDEF-202ENST00000544425 KIF9Q9HAQ2 790 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 SMYD2Q9NRG4 433 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 BFARQ9NZS9 450 aa16.39■□□□□ 0.22
SPDEF-202ENST00000544425 ZNF840PA6NDX5 716 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 C2CD2LO14523 706 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 SPAG7O75391 227 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 KRT37O76014 449 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 ZWINTO95229 277 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 SNRPAP09012 282 aaKnown RBP16.39■□□□□ 0.21
SPDEF-202ENST00000544425 RAG1P15918 1043 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 HMGA1P17096 107 aaKnown RBP16.39■□□□□ 0.21
SPDEF-202ENST00000544425 WDR4P57081 412 aaKnown RBP16.39■□□□□ 0.21
SPDEF-202ENST00000544425 IL9RQ01113 521 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 SLC18A2Q05940 514 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 FRG1Q14331 258 aaKnown RBP16.39■□□□□ 0.21
SPDEF-202ENST00000544425 ANO4Q32M45 955 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 C5orf22Q49AR2 442 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 TRMT10BQ6PF06 316 aaKnown RBP16.39■□□□□ 0.21
SPDEF-202ENST00000544425 SH2D5Q6ZV89 423 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 NECAB2Q7Z6G3 386 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 LINC00523Q86TU6 105 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 OR52K1Q8NGK4 314 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 MTBPQ96DY7 904 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 STK39Q9UEW8 545 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 MRPL42Q9Y6G3 142 aaKnown RBP16.39■□□□□ 0.21
SPDEF-202ENST00000544425 MICAL3Q7RTP6 2002 aa16.39■□□□□ 0.21
SPDEF-202ENST00000544425 POLBP06746 335 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 ALDH1A3P47895 512 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 SERPINB9P50453 376 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 NAB1Q13506 487 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 HNRNPDQ14103 355 aaKnown RBP16.38■□□□□ 0.21
SPDEF-202ENST00000544425 SPARCL1Q14515 664 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 QPCTQ16769 361 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 SPANXN3Q5MJ09 141 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 NAPEPLDQ6IQ20 393 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 LRRC34Q8IZ02 419 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 BANPQ8N9N5 519 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 AZIN2Q96A70 460 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 TRMT2BQ96GJ1 504 aaKnown RBP16.38■□□□□ 0.21
SPDEF-202ENST00000544425 FAM107BQ9H098 131 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 GLOD4Q9HC38 313 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 SYBUQ9NX95 663 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 ZNF212Q9UDV6 495 aa16.38■□□□□ 0.21
SPDEF-202ENST00000544425 IPO11Q9UI26 975 aaKnown RBP16.38■□□□□ 0.21
SPDEF-202ENST00000544425 TM9SF1O15321 606 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 KRT38O76015 456 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 ANXA9O76027 345 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CA4P22748 312 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CNTFP26441 200 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 RPA3P35244 121 aaPredicted RBP16.37■□□□□ 0.21
SPDEF-202ENST00000544425 PPP3CCP48454 512 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CRYMQ14894 314 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 ALFQ53S48 1182 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 HECTD3Q5T447 861 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
SPDEF-202ENST00000544425 RAP1GAP2Q684P5 730 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 PIGWQ7Z7B1 504 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 TMEM135Q86UB9 458 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CDKL2Q92772 493 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 IGSF8Q969P0 613 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 ZNF512Q96ME7 567 aaPredicted RBP16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CYP4F11Q9HBI6 524 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 SAMD15Q9P1V8 674 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CNTN5O94779 1100 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 URODP06132 367 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 HMBSP08397 361 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 VIMP08670 466 aaKnown RBP16.37■□□□□ 0.21
SPDEF-202ENST00000544425 RENBPP51606 427 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 YBEYP58557 167 aaPredicted RBP16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CRADDP78560 199 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 TNK2Q07912 1038 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 CDH17Q12864 832 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 FAM117BQ6P1L5 589 aa16.37■□□□□ 0.21
SPDEF-202ENST00000544425 MICALCLQ6ZW33 695 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms