RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TRANK1O15050 2925 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 HELZP42694 1942 aaKnown RBP31.15■■■□□ 2.58
CCM2-219ENST00000544363 A0A1B0GVM2 712 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 TCAF2A6NFQ2 919 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 GFRA2O00451 464 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 FDFT1P37268 417 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 POLD3Q15054 466 aaPredicted RBP31.15■■■□□ 2.58
CCM2-219ENST00000544363 TEX44Q53QW1 395 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 FAXCQ5TGI0 409 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 CHRDL2Q6WN34 429 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 PID1Q7Z2X4 250 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 CCDC25Q86WR0 208 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 ZSCAN18Q8TBC5 510 aaPredicted RBP31.15■■■□□ 2.58
CCM2-219ENST00000544363 PWWP2AQ96N64 755 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 KLHL8Q9P2G9 620 aaPredicted RBP31.15■■■□□ 2.58
CCM2-219ENST00000544363 TRHDEQ9UKU6 1024 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 HPCAL4Q9UM19 191 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 SHROOM3Q8TF72 1996 aa31.15■■■□□ 2.58
CCM2-219ENST00000544363 NYNRINQ9P2P1 1898 aaKnown RBP31.14■■■□□ 2.58
CCM2-219ENST00000544363 TCRBV7S3A2A0A539 114 aa31.14■■■□□ 2.58
CCM2-219ENST00000544363 MATN3O15232 486 aa31.14■■■□□ 2.58
CCM2-219ENST00000544363 CEBPBP17676 345 aa31.14■■■□□ 2.58
CCM2-219ENST00000544363 MAGEA6P43360 314 aa31.14■■■□□ 2.58
CCM2-219ENST00000544363 ZBTB17Q13105 803 aa31.14■■■□□ 2.58
CCM2-219ENST00000544363 USP13Q92995 863 aaPredicted RBP31.14■■■□□ 2.58
CCM2-219ENST00000544363 TDP1Q9NUW8 608 aa31.14■■■□□ 2.58
CCM2-219ENST00000544363 CCL26Q9Y258 94 aa31.14■■■□□ 2.58
CCM2-219ENST00000544363 IFI35P80217 286 aaPredicted RBP31.13■■■□□ 2.57
CCM2-219ENST00000544363 PARP6Q2NL67 630 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 TMEM184AQ6ZMB5 413 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 CEP128Q6ZU80 1094 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 BBS7Q8IWZ6 715 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 CPXM2Q8N436 756 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 IGSF9Q9P2J2 1179 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP31.13■■■□□ 2.57
CCM2-219ENST00000544363 E2F8A0AVK6 867 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 TMEM63AO94886 807 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 JCHAINP01591 159 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 CCNB1P14635 433 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 PMS2P54278 862 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 HYAL1Q12794 435 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 ZNF177Q13360 481 aaPredicted RBP31.13■■■□□ 2.57
CCM2-219ENST00000544363 SEMA5AQ13591 1074 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 HJURPQ8NCD3 748 aaPredicted RBP31.13■■■□□ 2.57
CCM2-219ENST00000544363 FATE1Q969F0 183 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 EXOC4Q96A65 974 aa31.13■■■□□ 2.57
CCM2-219ENST00000544363 TMA16Q96EY4 203 aaKnown RBP31.13■■■□□ 2.57
CCM2-219ENST00000544363 HSD17B3P37058 310 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 TCEAL5Q5H9L2 206 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 SPDYCQ5MJ68 293 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 C6orf118Q5T5N4 469 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 ITFG1Q8TB96 612 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 ING5Q8WYH8 240 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 TEKT5Q96M29 485 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 ZSWIM3Q96MP5 696 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 MAGEH1Q9H213 219 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 ZNF576Q9H609 170 aa31.12■■■□□ 2.57
CCM2-219ENST00000544363 DNAJC17Q9NVM6 304 aaKnown RBP31.12■■■□□ 2.57
CCM2-219ENST00000544363 TYW5A2RUC4 315 aaKnown RBP31.11■■■□□ 2.57
CCM2-219ENST00000544363 GOLGA8MH3BSY2 632 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 TBL1XO60907 577 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 GLP2RO95838 553 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 SERINC3Q13530 473 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 UAP1Q16222 522 aaPredicted RBP31.11■■■□□ 2.57
CCM2-219ENST00000544363 RARS2Q5T160 578 aaKnown RBP31.11■■■□□ 2.57
CCM2-219ENST00000544363 SETD3Q86TU7 594 aaPredicted RBP31.11■■■□□ 2.57
CCM2-219ENST00000544363 EFHBQ8N7U6 833 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 MAML1Q92585 1016 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 ARHGEF2Q92974 986 aaKnown RBP31.11■■■□□ 2.57
CCM2-219ENST00000544363 RBM15Q96T37 977 aaKnown RBP eCLIP31.11■■■□□ 2.57
CCM2-219ENST00000544363 IL12RB2Q99665 862 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 TBC1D30Q9Y2I9 924 aa31.11■■■□□ 2.57
CCM2-219ENST00000544363 ZBTB24O43167 697 aaPredicted RBP31.1■■■□□ 2.57
CCM2-219ENST00000544363 APRTP07741 180 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 TPSB2P20231 275 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 RGS19P49795 217 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 GNA12Q03113 381 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 GAD2Q05329 585 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 TPSAB1Q15661 275 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 ANO4Q32M45 955 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 ITPRIPL1Q6GPH6 555 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 POTEHQ6S545 545 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 UBLCP1Q8WVY7 318 aaPredicted RBP31.1■■■□□ 2.57
CCM2-219ENST00000544363 AGAP3Q96P47 875 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 MYO9BQ13459 2157 aa31.1■■■□□ 2.57
CCM2-219ENST00000544363 PRAMEF12O95522 483 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 PSMB4P28070 264 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 ACVRL1P37023 503 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 SYCP2LQ5T4T6 812 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 PPP1R21Q6ZMI0 780 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 MTERF4Q7Z6M4 381 aaKnown RBP31.09■■■□□ 2.57
CCM2-219ENST00000544363 ZNF354CQ86Y25 554 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 RELL1Q8IUW5 271 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 TDRD5Q8NAT2 981 aaKnown RBP31.09■■■□□ 2.57
CCM2-219ENST00000544363 USP33Q8TEY7 942 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 PHACTR1Q9C0D0 580 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 GBA3Q9H227 469 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 SEMA4AQ9H3S1 761 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 SP110Q9HB58 689 aa31.09■■■□□ 2.57
CCM2-219ENST00000544363 ILVBLA1L0T0 632 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms