RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 DAGLBQ8NCG7 672 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 TSPAN14Q8NG11 270 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 EEF1AKMT1Q8WVE0 214 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 FAM151AQ8WW52 585 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 APBB2Q92870 758 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 COL26A1Q96A83 441 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 QKIQ96PU8 341 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHD4-210ENST00000544040 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 TRMT13Q9NUP7 481 aaKnown RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 A0A087WZ62 844 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 LIN7AO14910 233 aaPredicted RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 STARP49675 285 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 USP46P62068 366 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 CROCCP3Q8IVE0 287 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 CLYBLQ8N0X4 340 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 ALG9Q9H6U8 611 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 RXRGP48443 463 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 PDK3Q15120 406 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 OLFML2AQ68BL7 652 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 ZNF720Q7Z2F6 126 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 POLNQ7Z5Q5 900 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 TSEN2Q8NCE0 465 aaKnown RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 SMPD4Q9NXE4 827 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 ENOPH1Q9UHY7 261 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 H3BMM5 538 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 TCEA3O75764 348 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 QPRTQ15274 297 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 CBWD6Q4V339 395 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 ZNF540Q8NDQ6 660 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 FDXACB1Q9BRP7 624 aaPredicted RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 PLA2G12BQ9BX93 195 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 CLIC5Q9NZA1 410 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 RAMP2O60895 175 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 ETS2P15036 469 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 ZNF7P17097 686 aaPredicted RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 BIKQ13323 160 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 UBAP2LQ14157 1087 aaKnown RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 FNBP1LQ5T0N5 605 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 IPCEF1Q8WWN9 437 aaPredicted RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 FAM192AQ9GZU8 254 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 ABCG8Q9H221 673 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 CRISPLD1Q9H336 500 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 ATP13A1Q9HD20 1204 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 DSEQ9UL01 958 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 SMIM22K7EJ46 135 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 OPLAHO14841 1288 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 OR56A5P0C7T3 313 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 NELFEP18615 380 aaKnown RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 LHX1P48742 406 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 EPHB3P54753 998 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 PFKFB4Q16877 469 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 RNASE12Q5GAN4 147 aaKnown RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 GPSM1Q86YR5 675 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 ADHFE1Q8IWW8 467 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 SLC25A23Q9BV35 468 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 MMADHCQ9H3L0 296 aaPredicted RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 TLR8Q9NR97 1041 aaKnown RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 AAASQ9NRG9 546 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 PTGFRNQ9P2B2 879 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 KLQ9UEF7 1012 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 NUDT5Q9UKK9 219 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 CFAP74Q9C0B2 1584 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 PRG2P13727 222 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 RPL14P50914 215 aaKnown RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 RBM44Q6ZP01 1051 aaKnown RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 DNAJB14Q8TBM8 379 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 ELL3Q9HB65 397 aaPredicted RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 CDH9Q9ULB4 789 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 VPS4BO75351 444 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 SHBGP04278 402 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 TSPAN8P19075 237 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 TBX4P57082 545 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 TTMPQ5BVD1 217 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 GPR107Q5VW38 600 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 RNF180Q86T96 592 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 NT5DC4Q86YG4 428 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 OFCC1Q8IZS5 231 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 MCUBQ9NWR8 336 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 IKZF3Q9UKT9 509 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 HMGCRP04035 888 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 SMYD1Q8NB12 490 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 VPS35Q96QK1 796 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 SAE1Q9UBE0 346 aaPredicted RBP15.68■□□□□ 0.1
CHD4-210ENST00000544040 OPTCQ9UBM4 332 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 GMPPBQ9Y5P6 360 aa15.68■□□□□ 0.1
CHD4-210ENST00000544040 SPATA31A3Q5VYP0 1347 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 LRRC14BA6NHZ5 514 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 STX11O75558 287 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 LCA5LO95447 670 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 EPORP19235 508 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 KLRK1P26718 216 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 SV2AQ7L0J3 742 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 CD302Q8IX05 232 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 FUKQ8N0W3 1084 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 ACER1Q8TDN7 264 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 OSMRQ99650 979 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 MTG1Q9BT17 334 aaPredicted RBP15.67■□□□□ 0.1
CHD4-210ENST00000544040 GDF3Q9NR23 364 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 HACL1Q9UJ83 578 aa15.67■□□□□ 0.1
CHD4-210ENST00000544040 PCDHGA3Q9Y5H0 932 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms