RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 FAM133BQ5BKY9 247 aaKnown RBP20.28■□□□□ 0.84
COPS7A-218ENST00000543939 KCTD11Q693B1 232 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 EXOC3L1Q86VI1 746 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 KLHDC8BQ8IXV7 354 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 MPP5Q8N3R9 675 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 MAML1Q92585 1016 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 EBNA1BP2Q99848 306 aaKnown RBP20.28■□□□□ 0.84
COPS7A-218ENST00000543939 KLF16Q9BXK1 252 aaPredicted RBP20.28■□□□□ 0.84
COPS7A-218ENST00000543939 IL21Q9HBE4 155 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 PLAC1Q9HBJ0 212 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 ZC3H7BQ9UGR2 993 aaKnown RBP20.28■□□□□ 0.84
COPS7A-218ENST00000543939 ASB3Q9Y575 518 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 CHD5Q8TDI0 1954 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 ARHGAP42A6NI28 874 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 ERI2A8K979 691 aaKnown RBP20.27■□□□□ 0.84
COPS7A-218ENST00000543939 F5H5T6 163 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 AP2A1O95782 977 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 CPP00450 1065 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 GSTA2P09210 222 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 SLC6A4P31645 630 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 SLC11A2P49281 568 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 GEMIN4P57678 1058 aaKnown RBP20.27■□□□□ 0.84
COPS7A-218ENST00000543939 ERVFC1P60507 584 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 USP33Q8TEY7 942 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 ARHGEF2Q92974 986 aaKnown RBP20.27■□□□□ 0.84
COPS7A-218ENST00000543939 FATE1Q969F0 183 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 CFAP36Q96G28 342 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 XPO6Q96QU8 1125 aaKnown RBP20.27■□□□□ 0.84
COPS7A-218ENST00000543939 DHRS4Q9BTZ2 278 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 MLPHQ9BV36 600 aaPredicted RBP20.27■□□□□ 0.84
COPS7A-218ENST00000543939 GKN1Q9NS71 199 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 IPO11Q9UI26 975 aaKnown RBP20.27■□□□□ 0.84
COPS7A-218ENST00000543939 IRAK3Q9Y616 596 aa20.27■□□□□ 0.84
COPS7A-218ENST00000543939 TCRBV9S1A1TA0A576 114 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 A6NNZ2 444 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 RASA4BC9J798 803 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 RASA4O43374 803 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 KLKB1P03952 638 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 ADH1AP07327 375 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 CTNNB1P35222 781 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 MDH1P40925 334 aaKnown RBP20.27■□□□□ 0.83
COPS7A-218ENST00000543939 EFTUD2Q15029 972 aaKnown RBP eCLIP20.27■□□□□ 0.832e-8■■■■■ 57.6
COPS7A-218ENST00000543939 TUBB8Q3ZCM7 444 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 CIR1Q86X95 450 aaPredicted RBP20.27■□□□□ 0.83
COPS7A-218ENST00000543939 LGI2Q8N0V4 545 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 HMCESQ96FZ2 354 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 ZNF419Q96HQ0 510 aaPredicted RBP20.27■□□□□ 0.83
COPS7A-218ENST00000543939 TCF25Q9BQ70 676 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 CNOT10Q9H9A5 744 aaKnown RBP20.27■□□□□ 0.83
COPS7A-218ENST00000543939 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.83
COPS7A-218ENST00000543939 TBK1Q9UHD2 729 aa20.27■□□□□ 0.83
COPS7A-218ENST00000543939 MAPKAPK2P49137 400 aa20.26■□□□□ 0.83
COPS7A-218ENST00000543939 SPARCL1Q14515 664 aa20.26■□□□□ 0.83
COPS7A-218ENST00000543939 TAOK1Q7L7X3 1001 aa20.26■□□□□ 0.83
COPS7A-218ENST00000543939 DENND1CQ8IV53 801 aa20.26■□□□□ 0.83
COPS7A-218ENST00000543939 CYTH2Q99418 400 aa20.26■□□□□ 0.83
COPS7A-218ENST00000543939 RETREG1Q9H6L5 497 aa20.26■□□□□ 0.83
COPS7A-218ENST00000543939 TTLL3Q9Y4R7 772 aa20.26■□□□□ 0.83
COPS7A-218ENST00000543939 SDR42E2A6NKP2 422 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 PEX11BO96011 259 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 C1QAP02745 245 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 CORO1AP31146 461 aaKnown RBP20.25■□□□□ 0.83
COPS7A-218ENST00000543939 STX2P32856 288 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 GNGT1P63211 74 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 GUCY1A3Q02108 690 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 TMED2Q15363 201 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 ANO4Q32M45 955 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 PABPC1LQ4VXU2 614 aaKnown RBP20.25■□□□□ 0.83
COPS7A-218ENST00000543939 TTC19Q6DKK2 380 aaPredicted RBP20.25■□□□□ 0.83
COPS7A-218ENST00000543939 RFWD3Q6PCD5 774 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 UNC5AQ6ZN44 842 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 CCDC149Q6ZUS6 474 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 OTOP3Q7RTS5 596 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 EMILIN2Q9BXX0 1053 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 PSMC3IPQ9P2W1 217 aaPredicted RBP20.25■□□□□ 0.83
COPS7A-218ENST00000543939 MAD1L1Q9Y6D9 718 aa20.25■□□□□ 0.83
COPS7A-218ENST00000543939 TRDMT1O14717 391 aaKnown RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 OLFM2O95897 454 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 IFNAR2P48551 515 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 PRPSAP1Q14558 356 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 ADGRD1Q6QNK2 874 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 KREMEN2Q8NCW0 462 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 SPPL3Q8TCT6 385 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 ARNTL2Q8WYA1 636 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 WBP2Q969T9 261 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 STAMBPL1Q96FJ0 436 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 OXNAD1Q96HP4 312 aaPredicted RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 ZFRQ96KR1 1074 aaKnown RBP20.24■□□□□ 0.83
COPS7A-218ENST00000543939 FCRL5Q96RD9 977 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 PAFAH2Q99487 392 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 LRRC3Q9BY71 257 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 GLOD4Q9HC38 313 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 CASS4Q9NQ75 786 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 ENTPD7Q9NQZ7 604 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 PCDHA11Q9Y5I1 949 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 LINC01553A4QN01 128 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 C2orf71A6NGG8 1288 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 FOXO6A8MYZ6 492 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 PSMD3O43242 534 aa20.24■□□□□ 0.83
COPS7A-218ENST00000543939 RAMP2O60895 175 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms