RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ZYG11AQ6WRX3 759 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 STRA8Q7Z7C7 330 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 SPATA24Q86W54 205 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 PGAM4Q8N0Y7 254 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 URGCPQ8TCY9 931 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 NT5C3BQ969T7 300 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF669Q96BR6 464 aaPredicted RBP14.01□□□□□ -0.17
VPS33A-208ENST00000543633 CDCA5Q96FF9 252 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 SNX27Q96L92 541 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 PRICKLE1Q96MT3 831 aaPredicted RBP14.01□□□□□ -0.17
VPS33A-208ENST00000543633 NMRAL1Q9HBL8 299 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 OXSMQ9NWU1 459 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 HACD3Q9P035 362 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 CNOT11Q9UKZ1 510 aaKnown RBP14.01□□□□□ -0.17
VPS33A-208ENST00000543633 MFHAS1Q9Y4C4 1052 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 E9PBE3 544 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 XPO1O14980 1071 aaKnown RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 KLHL41O60662 606 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 TADA2AO75478 443 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 CNMDO75829 334 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 CABYRO75952 493 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 TNFAIP8O95379 198 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 TXNP10599 105 aaKnown RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 PPARGP37231 505 aaPredicted RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 MLH1P40692 756 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 NPY2RP49146 381 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 SULT1E1P49888 294 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 PRKAA1Q13131 559 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 ADRM1Q16186 407 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 HSP90AA5PQ58FG0 334 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 PIGGQ5H8A4 983 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 LIPMQ5VYY2 423 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 SEL1L3Q68CR1 1132 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 FSTL4Q6MZW2 842 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 CMC1Q7Z7K0 106 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 DRAXINQ8NBI3 349 aaPredicted RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 OR6B3Q8NGW1 331 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 CLEC4CQ8WTT0 213 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 FCRL3Q96P31 734 aaPredicted RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 LENG8Q96PV6 779 aaPredicted RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 TSPAN18Q96SJ8 248 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 SLC9A7Q96T83 725 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 PRDM12Q9H4Q4 367 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 ATXN10Q9UBB4 475 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 RIMS3Q9UJD0 308 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 VANGL2Q9ULK5 521 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 MCM3APO60318 1980 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 LOC100653049A0A140TA62 436 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 ZCWPW2A0A1B0GU75 182 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 H0YJX3 145 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 TXNDC9O14530 226 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 DCLK1O15075 740 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 STRNO43815 780 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 KRT34O76011 436 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 SORBS2O94875 1100 aaKnown RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 LGALS2P05162 132 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 COL6A2P12110 1019 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 POLD2P49005 469 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 NUDT2P50583 147 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 USP4Q13107 963 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 MPP3Q13368 585 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 LAMC2Q13753 1193 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 CNGA3Q16281 694 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF423Q2M1K9 1284 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 BORAQ6PGQ7 559 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 NAPRTQ6XQN6 538 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 FBXO16Q8IX29 292 aaPredicted RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 CNTD1Q8N815 330 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 MAPK15Q8TD08 544 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 LRGUKQ96M69 825 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 GPR22Q99680 433 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 GATA5Q9BWX5 397 aaPredicted RBP14□□□□□ -0.17
VPS33A-208ENST00000543633 STAP1Q9ULZ2 295 aa14□□□□□ -0.17
VPS33A-208ENST00000543633 CAPN8A6NHC0 703 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 DNAJA2O60884 412 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 C2P06681 752 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 LCP1P13796 627 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 NOS2P35228 1153 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 RPL14P50914 215 aaKnown RBP13.99□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF135P52742 658 aaPredicted RBP13.99□□□□□ -0.17
VPS33A-208ENST00000543633 CYLC2Q14093 348 aaPredicted RBP13.99□□□□□ -0.17
VPS33A-208ENST00000543633 FLOT2Q14254 428 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 TLR1Q15399 786 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 ANO4Q32M45 955 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 TMEM259Q4ZIN3 620 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 KCTD11Q693B1 232 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 ITPRIPL1Q6GPH6 555 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 SNX32Q86XE0 403 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 DSELQ8IZU8 1212 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 PLD6Q8N2A8 252 aaKnown RBP13.99□□□□□ -0.17
VPS33A-208ENST00000543633 PYROXD2Q8N2H3 581 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 DDI1Q8WTU0 396 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 NTAN1Q96AB6 310 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF560Q96MR9 790 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 TSNARE1Q96NA8 513 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 AGAP3Q96P47 875 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 OR52B2Q96RD2 323 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 NPY6RQ99463 290 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 SHCBP1LQ9BZQ2 653 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 MRPL40Q9NQ50 206 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms