RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CTAGE1Q96RT6 745 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 HNRNPABQ99729 332 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 SMOQ99835 787 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 SLF1Q9BQI6 1058 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 KRT23Q9C075 422 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 NSRP1Q9H0G5 558 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 TAF1DQ9H5J8 278 aaPredicted RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 CLK4Q9HAZ1 481 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 C6orf203Q9P0P8 240 aaPredicted RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 L3MBTL1Q9Y468 752 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 PCDHB2Q9Y5E7 798 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 CFAP20Q9Y6A4 193 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 AFF2P51816 1311 aa6.15□□□□□ -1.43
XRCC4-206ENST00000542685 SALL1Q9NSC2 1324 aa6.15□□□□□ -1.43
XRCC4-206ENST00000542685 METP08581 1390 aa6.15□□□□□ -1.43
XRCC4-206ENST00000542685 TMEM94Q12767 1356 aa6.15□□□□□ -1.43
XRCC4-206ENST00000542685 CARMIL3Q8ND23 1372 aa6.15□□□□□ -1.43
XRCC4-206ENST00000542685 HEG1Q9ULI3 1381 aa6.15□□□□□ -1.43
XRCC4-206ENST00000542685 MYH7P12883 1935 aa6.15□□□□□ -1.43
XRCC4-206ENST00000542685 C4AP0C0L4 1744 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 C4BP0C0L5 1744 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 hCG_2014768A0A024R1R8 64 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 TTC34A8MYJ7 566 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ADM5C9JUS6 153 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 E9PLN8 166 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 F2RL2O00254 374 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 IDH3BO43837 385 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 CBFA2T3O75081 653 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 BBOX1O75936 387 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 GFPT2O94808 682 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ALDH2P05091 517 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 HNRNPCP07910 306 aaKnown RBP eCLIP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 POLE2P56282 527 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 NHLH1Q02575 133 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 TRIM14Q14142 442 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 RRS1Q15050 365 aaKnown RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ARHGEF6Q15052 776 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 MTHFSDQ2M296 383 aaKnown RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ADCK5Q3MIX3 580 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 CCDC122Q5T0U0 273 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 BEND3Q5T5X7 828 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 TSTD2Q5T7W7 516 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 AGBL2Q5U5Z8 902 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 PAPD7Q5XG87 772 aaKnown RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 SLC4A10Q6U841 1118 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 CLEC4GQ6UXB4 293 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 SLC30A10Q6XR72 485 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 PPP1R42Q7Z4L9 355 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 HOOK3Q86VS8 718 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 LSMEM2Q8N112 164 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ENDOVQ8N8Q3 282 aaKnown RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 TRIML1Q8N9V2 468 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 B3GALNT2Q8NCR0 500 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ATRIPQ8WXE1 791 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 CLMNQ96JQ2 1002 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 SMAD5Q99717 465 aaKnown RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 VKORC1Q9BQB6 163 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 NACAP1Q9BZK3 213 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 RPAP3Q9H6T3 665 aaPredicted RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 SLAMF7Q9NQ25 335 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 SAMSN1Q9NSI8 373 aaKnown RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 UBAP1Q9NZ09 502 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 RABL2AQ9UBK7 228 aaPredicted RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ARPP21Q9UBL0 812 aaPredicted RBP6.14□□□□□ -1.43
XRCC4-206ENST00000542685 TNKSO95271 1327 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 NFAT5O94916 1531 aa6.14□□□□□ -1.43
XRCC4-206ENST00000542685 ECM29Q5VYK3 1845 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SMIM31A0A1B0GVY4 71 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 LRRC14BA6NHZ5 514 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ZNF785A8K8V0 405 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 FAM25EA8MYX2 175 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 AKR1B15C9JRZ8 316 aaPredicted RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SPECC1L-ADORA2AF8WAN1 911 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 O00370 1275 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 POLRMTO00411 1230 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 RBMXL2O75526 392 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SURF6O75683 361 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ATP5HO75947 161 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 YEATS4O95619 227 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SERPINC1P01008 464 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ANXA1P04083 346 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 PTPN2P17706 415 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 S100A5P33763 92 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 PCK1P35558 622 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 HSPA9P38646 679 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 NPTX2P47972 431 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ADKP55263 362 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 IGBP1P78318 339 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 POU6F2P78424 691 aaPredicted RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 DSC2Q02487 901 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ITGB3BPQ13352 177 aaPredicted RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 HLXQ14774 488 aaPredicted RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SAFBQ15424 915 aaKnown RBP eCLIP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 TTMPQ5BVD1 217 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SYCP2LQ5T4T6 812 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 TMEM154Q6P9G4 183 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 CCDC174Q6PII3 467 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 CCDC129Q6ZRS4 1044 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 CROCCP2Q86T23 111 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms