RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 DLL3Q9NYJ7 618 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 VPS28Q9UK41 221 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 PILRBQ9UKJ0 227 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 ILVBLA1L0T0 632 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 FAM72CH0Y354 149 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 ATMINO43313 823 aaPredicted RBP15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 ATP9BO43861 1147 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 RHOCP08134 193 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 PLEKP08567 350 aaPredicted RBP15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 ACADMP11310 421 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 HNRNPH3P31942 346 aaKnown RBP15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 CASP14P31944 242 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 HOXD12P35452 270 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 NUMBP49757 651 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 ZNF33AQ06730 810 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 C6orf118Q5T5N4 469 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 FAM72AQ5TYM5 149 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 LYSMD4Q5XG99 296 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 FAM72DQ6L9T8 149 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 ZNF783Q6ZMS7 281 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 TFAP2DQ7Z6R9 452 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 FAM72BQ86X60 149 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 SYT12Q8IV01 421 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 PTPRN2Q92932 1015 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 MUC3BQ9H195 1237 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 TMEM74BQ9NUR3 256 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 ADAMTS1Q9UHI8 967 aa15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.86■□□□□ 0.13
ECHDC2-223ENST00000542552 PI4KAP42356 2102 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 A0A0D9SEW6 157 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 CBFA2T2O43439 604 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 GDF9O60383 454 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 LRIG2O94898 1065 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 MYBL1P10243 752 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 SDHBP21912 280 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 ITPKAP23677 461 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 OR1E1P30953 314 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 L1CAMP32004 1257 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 NNMTP40261 264 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 DPP6P42658 865 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 ID4P47928 161 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 AIF1P55008 147 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 ZNF252P-AS1Q0IIN9 211 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 RSPO4Q2I0M5 234 aaPredicted RBP15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 ZNF776Q68DI1 518 aaPredicted RBP15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 SPECC1LQ69YQ0 1117 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 TCEAL6Q6IPX3 200 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 ARMCX6Q7L4S7 300 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 TMC6Q7Z403 805 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 SLFN11Q7Z7L1 901 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 NLRP14Q86W24 1093 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 CACUL1Q86Y37 369 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 DRC7Q8IY82 874 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 SH2D3CQ8N5H7 860 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 DEFB119Q8N690 84 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 RNF214Q8ND24 703 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 CADM4Q8NFZ8 388 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 FNIP1Q8TF40 1166 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 PIGKQ92643 395 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 TCEAL3Q969E4 200 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 TRIM11Q96F44 468 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 C2orf49Q9BVC5 232 aaPredicted RBP15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 RXFP3Q9NSD7 469 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 ARHGAP20Q9P2F6 1191 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 CNOT8Q9UFF9 292 aaKnown RBP15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 EVLQ9UI08 416 aaPredicted RBP15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 VPS51Q9UID3 782 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 SCML1Q9UN30 329 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 HS3ST2Q9Y278 367 aa15.85■□□□□ 0.13
ECHDC2-223ENST00000542552 A0A087X0T9 212 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 NDUFS2O75306 463 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 FAM228BP0C875 321 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 VAV1P15498 845 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 RHOQP17081 205 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 LIMK1P53667 647 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 KRT83P78385 493 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 SEMA3BQ13214 749 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 NUMA1Q14980 2115 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 TDRD12Q587J7 1177 aaKnown RBP15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 VSTM4Q8IW00 320 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 ARFGAP1Q8N6T3 406 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 C12orf50Q8NA57 414 aaPredicted RBP15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 DCAF4L2Q8NA75 395 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 NETO1Q8TDF5 533 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 FOXJ1Q92949 421 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 ZNF653Q96CK0 615 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 HSPA12BQ96MM6 686 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 TRIM7Q9C029 511 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 PCED1AQ9H1Q7 454 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 PABPC3Q9H361 631 aaKnown RBP15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 NDFIP2Q9NV92 336 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 TMEM248Q9NWD8 314 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 SLC25A13Q9UJS0 675 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 FZD10Q9ULW2 581 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 NENFQ9UMX5 172 aa15.84■□□□□ 0.13
ECHDC2-223ENST00000542552 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.83■□□□□ 0.12
ECHDC2-223ENST00000542552 PATE3B3GLJ2 98 aa15.83■□□□□ 0.12
ECHDC2-223ENST00000542552 KHNYNO15037 678 aaKnown RBP15.83■□□□□ 0.12
ECHDC2-223ENST00000542552 SNAP91O60641 907 aa15.83■□□□□ 0.12
ECHDC2-223ENST00000542552 RNASEH1O60930 286 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms