RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CRADDP78560 199 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 CDC42EP1Q00587 391 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 DEUP1Q05D60 604 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 SEMA3BQ13214 749 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 RCN2Q14257 317 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 PDK1Q15118 436 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 CCDC153Q494R4 210 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 MDH1BQ5I0G3 518 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 FBXO47Q5MNV8 452 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 GRTP1Q5TC63 336 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 C6orf163Q5TEZ5 329 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 CLEC14AQ86T13 490 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 TMEM135Q86UB9 458 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 C10orf107Q8IVU9 208 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 DEFB106AQ8N104 65 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF567Q8N184 647 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 CCDC33Q8N5R6 958 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 RNF139Q8WU17 664 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 STON2Q8WXE9 905 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 KCTD13Q8WZ19 329 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 ATP2A3Q93084 1043 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 CERS2Q96G23 380 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 CLPTM1LQ96KA5 538 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 RILPQ96NA2 401 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 FCRL3Q96P31 734 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC2A13Q96QE2 648 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC9A7Q96T83 725 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 HNRNPABQ99729 332 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 CPNE1Q99829 537 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 THTPAQ9BU02 230 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 APOL6Q9BWW8 343 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 EIF2AQ9BY44 585 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 VCXQ9H320 206 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 SYBUQ9NX95 663 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 TMEM216Q9P0N5 145 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 COPG2Q9UBF2 871 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 ABT1Q9ULW3 272 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 UBQLN1Q9UMX0 589 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 APOBEC2Q9Y235 224 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 PCDHB12Q9Y5F1 795 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 NR2E3Q9Y5X4 410 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 RAD54BQ9Y620 910 aa5.32□□□□□ -1.56
ATPAF1-212ENST00000542495 COL4A4P53420 1690 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF236Q9UL36 1845 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 KAT6AQ92794 2004 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ZCWPW2A0A1B0GU75 182 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 RRN3P2A6NIE6 340 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 EIF4E1BA6NMX2 242 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 KPNA7A9QM74 516 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 TMEM114B3SHH9 223 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 G3V2L1 256 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ADCY6O43306 1168 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 AHCYL1O43865 530 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 RECQL4O94761 1208 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 AP2A1O95782 977 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 SNAI1O95863 264 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 MPOP05164 745 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 POLBP06746 335 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 RALBP11234 206 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 MX2P20592 715 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 WARSP23381 471 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 MPSTP25325 297 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ADORA2BP29275 332 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 NOS2P35228 1153 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PNPLA4P41247 253 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 GARSP41250 739 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ADCYAP1R1P41586 468 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 HCAR3P49019 387 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 SULT1E1P49888 294 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 LBX1P52954 281 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 COPAP53621 1224 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 LIMK2P53671 638 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 AIF1P55008 147 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 SESN2P58004 480 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PITX1P78337 314 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 IRX4P78413 519 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 MXRA7P84157 204 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PDE1BQ01064 536 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 SCAPQ12770 1279 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 CCNIQ14094 377 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 KIZQ2M2Z5 673 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PPM1JQ5JR12 505 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 C1orf146Q5VVC0 180 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 METTL21CQ5VZV1 264 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 KCTD11Q693B1 232 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 CASC4Q6P4E1 433 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 NOTUMQ6P988 496 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 EPGNQ6UW88 154 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 RNF111Q6ZNA4 994 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 RFX8Q6ZV50 586 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PAQR9Q6ZVX9 377 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PIGZQ86VD9 579 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM131BQ86XD5 332 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 KLHDC8BQ8IXV7 354 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PHC3Q8NDX5 983 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PPP1R14CQ8TAE6 165 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 SHKBP1Q8TBC3 707 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC2A14Q8TDB8 520 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ACTRT2Q8TDY3 377 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms