RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ATG14Q6ZNE5 492 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 NUDCD3Q8IVD9 361 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 APLFQ8IW19 511 aaPredicted RBP17.58■□□□□ 0.4
SPIDR-227ENST00000541342 COLGALT2Q8IYK4 626 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 SIGLEC10Q96LC7 697 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 DNAJB4Q9UDY4 337 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 MFHAS1Q9Y4C4 1052 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 BPTFQ12830 3046 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
SPIDR-227ENST00000541342 FAM159BA6NKW6 160 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 CLGNO14967 610 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 MAP3K7O43318 606 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 BPGMP07738 259 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 SELPP16109 830 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 GOT1P17174 413 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 PRMT2P55345 433 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 TUBB3Q13509 450 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 ADAM32Q8TC27 787 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 WWP1Q9H0M0 922 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 TBC1D13Q9NVG8 400 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 PPM1HQ9ULR3 514 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 MYO18AQ92614 2054 aaKnown RBP17.57■□□□□ 0.4
SPIDR-227ENST00000541342 METTL18O95568 372 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 GRIA1P42261 906 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 GBE1Q04446 702 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 NME3Q13232 169 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 ATG16L1Q676U5 607 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 THTPAQ9BU02 230 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 PAPOLBQ9NRJ5 636 aaKnown RBP17.57■□□□□ 0.4
SPIDR-227ENST00000541342 SDR42E2A6NKP2 422 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 CRHR1P34998 444 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 NDUFAF2Q8N183 169 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 ARHGAP24Q8N264 748 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 SCOCQ9UIL1 159 aa17.57■□□□□ 0.4
SPIDR-227ENST00000541342 BCLAF3A2AJT9 711 aaKnown RBP17.56■□□□□ 0.4
SPIDR-227ENST00000541342 MEI4A8MW99 385 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 USP1O94782 785 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 ZBED1O96006 694 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 AMHP03971 560 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 CDK18Q07002 472 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 TCTN1Q2MV58 587 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 SLC30A9Q6PML9 568 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 SLC25A41Q8N5S1 370 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 VCXQ9H320 206 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 ANLNQ9NQW6 1124 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 SLC17A6Q9P2U8 582 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 STAP1Q9ULZ2 295 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 SCN5AQ14524 2016 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 VWA8A3KMH1 1905 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 PAX3P23760 479 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 PAPOLAP51003 745 aaKnown RBP17.56■□□□□ 0.4
SPIDR-227ENST00000541342 TRMT5Q32P41 509 aaKnown RBP17.56■□□□□ 0.4
SPIDR-227ENST00000541342 CCDC33Q8N5R6 958 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 SLC7A14Q8TBB6 771 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 FRMD8Q9BZ67 464 aaPredicted RBP17.56■□□□□ 0.4
SPIDR-227ENST00000541342 EMCNQ9ULC0 261 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 PCDHB8Q9UN66 801 aa17.56■□□□□ 0.4
SPIDR-227ENST00000541342 A0A088AWK7 358 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 I6L893 689 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 SERPINA6P08185 405 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 TYMPP19971 482 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 DEUP1Q05D60 604 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 ARHGEF6Q15052 776 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 NCBP2-AS2Q69YL0 99 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 CCNJLQ8IV13 435 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 TRIM42Q8IWZ5 723 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 STKLD1Q8NE28 680 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 DBF4BQ8NFT6 615 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 KLC2Q9H0B6 622 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 WDR6Q9NNW5 1121 aaKnown RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 ITM2AO43736 263 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 IZUMO2Q6UXV1 221 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 CRLF3Q8IUI8 442 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 PPFIBP2Q8ND30 876 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 DDX50Q9BQ39 737 aaKnown RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 FTHL17Q9BXU8 183 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 SPECC1L-ADORA2AF8WAN1 911 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 LYPLA1O75608 230 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 LTFP02788 710 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 OR4Q2P0C623 313 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 NCAM1P13591 858 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 OR1G1P47890 313 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 YWHAHQ04917 246 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 RNF111Q6ZNA4 994 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 THEM5Q8N1Q8 247 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 MCUQ8NE86 351 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 GSDMBQ8TAX9 411 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 URGCPQ8TCY9 931 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 EDEM1Q92611 657 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 EBNA1BP2Q99848 306 aaKnown RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 DMAP1Q9NPF5 467 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 SAGE1Q9NXZ1 904 aa17.55■□□□□ 0.4
SPIDR-227ENST00000541342 PRG3Q9Y2Y8 225 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-227ENST00000541342 ENPP3O14638 875 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 BUD23O43709 281 aaKnown RBP17.54■□□□□ 0.4
SPIDR-227ENST00000541342 KRT38O76015 456 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 UBTFL6P0CB48 400 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-227ENST00000541342 WASHC5Q12768 1159 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 RABGAP1LQ5R372 815 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms