RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 MDGA1Q8NFP4 955 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 VN1R2Q8NFZ6 395 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 AUTS2Q8WXX7 1259 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ZMAT2Q96NC0 199 aaKnown RBP6.85□□□□□ -1.31
TTR-203ENST00000541025 FAM193BQ96PV7 902 aaPredicted RBP6.85□□□□□ -1.31
TTR-203ENST00000541025 TRIM9Q9C026 710 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ZBP1Q9H171 429 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 BLZF1Q9H2G9 400 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 TNMDQ9H2S6 317 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 POFUT1Q9H488 388 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 GOLPH3LQ9H4A5 285 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ST6GALNAC4Q9H4F1 302 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 NCDNQ9UBB6 729 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 LZTS1Q9Y250 596 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 HPSEQ9Y251 543 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 PRG3Q9Y2Y8 225 aaPredicted RBP6.85□□□□□ -1.31
TTR-203ENST00000541025 TRIOO75962 3097 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 A0A0A6YYK5 440 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 CASTOR2A6NHX0 329 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 H0YCG3 227 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 H3BQ06 376 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 HNRNPDLO14979 420 aaKnown RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 PIGRP01833 764 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 PDGFRBP09619 1106 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 CXCL8P10145 99 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 MCF2P10911 925 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 KCNA5P22460 613 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 CMA1P23946 247 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 NRIP1P48552 1158 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 NDUFA8P51970 172 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 SPAG1Q07617 926 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 MCL1Q07820 350 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 COASYQ13057 564 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 CUL4BQ13620 913 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 KCNC3Q14003 757 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 DUSP6Q16828 381 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 XKR4Q5GH76 650 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 HERC4Q5GLZ8 1057 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 RABL3Q5HYI8 236 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 ADALQ6DHV7 355 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 CD300LGQ6UXG3 332 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 ALKAL1Q6UXT8 129 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 ESPNLQ6ZVH7 1005 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 ELOA2Q8IYF1 753 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 RNF168Q8IYW5 571 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 VPS52Q8N1B4 723 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 IQUBQ8NA54 791 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 HASPINQ8TF76 798 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 ATXN2LQ8WWM7 1075 aaKnown RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 RSPH1Q8WYR4 309 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 C18orf25Q96B23 403 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 BICD1Q96G01 975 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 B3GALT6Q96L58 329 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 SNX27Q96L92 541 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 ASB2Q96Q27 587 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 PPP1R10Q96QC0 940 aaKnown RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 RPS6KC1Q96S38 1066 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 C7orf25Q9BPX7 421 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 TMEM175Q9BSA9 504 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 SOX7Q9BT81 388 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 TCHPQ9BT92 498 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 CCDC94Q9BW85 323 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 MS4A5Q9H3V2 200 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 CUEDC2Q9H467 287 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 UBE2ZQ9H832 354 aaPredicted RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 MRPL44Q9H9J2 332 aaKnown RBP6.84□□□□□ -1.31
TTR-203ENST00000541025 EMC7Q9NPA0 242 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 ENTPD7Q9NQZ7 604 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 PANK4Q9NVE7 773 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 NOTCH4Q99466 2003 aa6.84□□□□□ -1.31
TTR-203ENST00000541025 OBSL1O75147 1896 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 A0A0B4J269 797 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 FAM237AA0A1B0GTK4 181 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 SMIM28A0A1B0GU29 152 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 CLDN3O15551 220 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 KLRC4O43908 158 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 GCNT3O95395 438 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 ALDH2P05091 517 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 THP07101 528 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 GAAP10253 952 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 CTSAP10619 480 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 GAP43P17677 238 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 ADSSP30520 456 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 PTGS2P35354 604 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 HOXD13P35453 343 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 MATR3P43243 847 aaKnown RBP eCLIP6.83□□□□□ -1.32
TTR-203ENST00000541025 LIG4P49917 911 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 CLCNKBP51801 687 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 ASIC1P78348 528 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 NUCB2P80303 420 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 KRT17Q04695 432 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 CLUL1Q15846 466 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 PLEKHG6Q3KR16 790 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 CT47A1Q5JQC4 288 aaPredicted RBP6.83□□□□□ -1.32
TTR-203ENST00000541025 GPR158Q5T848 1215 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 NAIF1Q69YI7 327 aaPredicted RBP6.83□□□□□ -1.32
TTR-203ENST00000541025 MRGPRGQ86SM5 289 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 DDX42Q86XP3 938 aaKnown RBP eCLIP6.83□□□□□ -1.32
TTR-203ENST00000541025 LDLRAD3Q86YD5 345 aa6.83□□□□□ -1.32
TTR-203ENST00000541025 UNC5BQ8IZJ1 945 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms