RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SMAD1Q15797 465 aaKnown RBP6.62□□□□□ -1.35
YBX3-210ENST00000540975 ENTPD8Q5MY95 495 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 RASGRP2Q7LDG7 609 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 GALNT15Q8N3T1 639 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 TRAPPC12Q8WVT3 735 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 RUBCNQ92622 972 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 KCNJ9Q92806 393 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.62□□□□□ -1.35
YBX3-210ENST00000540975 FRMD8Q9BZ67 464 aaPredicted RBP6.62□□□□□ -1.35
YBX3-210ENST00000540975 SAYSD1Q9NPB0 183 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 SLC25A13Q9UJS0 675 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 RIPOR2Q9Y4F9 1068 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 NPIPB13A6NJU9 1138 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 NPIPB5A8MRT5 1133 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 NPIPB4C9JG80 1138 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 HLA-DQA2P01906 255 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 LYL1P12980 280 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 KLRC2P26717 231 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 SLC16A2P36021 539 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 PRKAA2P54646 552 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 MAPK7Q13164 816 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 CUL4BQ13620 913 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 ODF3L2Q3SX64 289 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 DAB2IPQ5VWQ8 1189 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 SYNE3Q6ZMZ3 975 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 C9orf47Q6ZRZ4 202 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 SAMD14Q8IZD0 417 aaPredicted RBP6.61□□□□□ -1.35
YBX3-210ENST00000540975 VPS52Q8N1B4 723 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 ARPC5LQ9BPX5 153 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 MAP6D1Q9H9H5 199 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 PLEKHA2Q9HB19 425 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 G6PC2Q9NQR9 355 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 TMEM248Q9NWD8 314 aa6.61□□□□□ -1.35
YBX3-210ENST00000540975 MDM4O15151 490 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 PEX14O75381 377 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 TFRCP02786 760 aaKnown RBP6.6□□□□□ -1.35
YBX3-210ENST00000540975 GSTM2P28161 218 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 TRAPPC10P48553 1259 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 RBM5P52756 815 aaKnown RBP eCLIP6.6□□□□□ -1.35
YBX3-210ENST00000540975 PPATQ06203 517 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 POSTNQ15063 836 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 ALG10Q5BKT4 473 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 ALG10BQ5I7T1 473 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 AAGABQ6PD74 315 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 IGFN1Q86VF2 1251 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 PELI3Q8N2H9 469 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 SLC25A41Q8N5S1 370 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 FSIP1Q8NA03 581 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 INPP5DQ92835 1189 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 SDCCAG3Q96C92 435 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 ZNF419Q96HQ0 510 aaPredicted RBP6.6□□□□□ -1.35
YBX3-210ENST00000540975 CLPBQ9H078 707 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 Q9N2J8 555 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 PNRC2Q9NPJ4 139 aaKnown RBP6.6□□□□□ -1.35
YBX3-210ENST00000540975 KIF17Q9P2E2 1029 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 KLQ9UEF7 1012 aa6.6□□□□□ -1.35
YBX3-210ENST00000540975 TRBV5-7A0A0A0MS05 114 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 ALPLP05186 524 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 ACP5P13686 325 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 HOXB2P14652 356 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 TYK2P29597 1187 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 AVPR2P30518 371 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 P2RX3P56373 397 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 WASHC2DQ5SRD0 308 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 ZNF549Q6P9A3 640 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 ZNF517Q6ZMY9 492 aaPredicted RBP6.59□□□□□ -1.35
YBX3-210ENST00000540975 RNF144BQ7Z419 303 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 CCDC25Q86WR0 208 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 ZDHHC17Q8IUH5 632 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 SCN4BQ8IWT1 228 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 LPAR1Q92633 364 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 GOLGA1Q92805 767 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 NAF1Q96HR8 494 aaKnown RBP6.59□□□□□ -1.35
YBX3-210ENST00000540975 TWSG1Q9GZX9 223 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 PTPRHQ9HD43 1115 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 SIRT3Q9NTG7 399 aaPredicted RBP6.59□□□□□ -1.35
YBX3-210ENST00000540975 TBC1D14Q9P2M4 693 aa6.59□□□□□ -1.35
YBX3-210ENST00000540975 GAGE12JA6NER3 117 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 H0YGN5 161 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 SEPT4O43236 478 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 KLKB1P03952 638 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 ADD2P35612 726 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 AARSP49588 968 aaKnown RBP eCLIP6.58□□□□□ -1.36
YBX3-210ENST00000540975 CYP2J2P51589 502 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 PRKG1Q13976 671 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 Q5PR19 223 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 KTI12Q96EK9 354 aaPredicted RBP6.58□□□□□ -1.36
YBX3-210ENST00000540975 FAM167BQ9BTA0 163 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 HERC2P3Q9BVR0 1158 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.58□□□□□ -1.36
YBX3-210ENST00000540975 ISCUQ9H1K1 167 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 HIPK3Q9H422 1215 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 RMI1Q9H9A7 625 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 CHODLQ9H9P2 273 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 RNF146Q9NTX7 359 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 THAP1Q9NVV9 213 aa6.58□□□□□ -1.36
YBX3-210ENST00000540975 PROB1E7EW31 1015 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 FCGR2AP12318 317 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms