RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PCDHGA5Q9Y5G8 931 aa17.34■□□□□ 0.37
CD9-209ENST00000540891 SCINQ9Y6U3 715 aa17.34■□□□□ 0.37
CD9-209ENST00000540891 CFAP54Q96N23 3096 aa17.34■□□□□ 0.37
CD9-209ENST00000540891 BCLAF3A2AJT9 711 aaKnown RBP17.33■□□□□ 0.36
CD9-209ENST00000540891 LRP3O75074 770 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 MFAP3LO75121 409 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 IGLV3-19P01714 112 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 VAV1P15498 845 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 RHOQP17081 205 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 L1CAMP32004 1257 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 PTGER3P43115 390 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 TPMTP51580 245 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 ADKP55263 362 aaKnown RBP17.33■□□□□ 0.36
CD9-209ENST00000540891 GFPT1Q06210 699 aaPredicted RBP17.33■□□□□ 0.36
CD9-209ENST00000540891 SEMA3BQ13214 749 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
CD9-209ENST00000540891 CCDC122Q5T0U0 273 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 CYP4V2Q6ZWL3 525 aaPredicted RBP17.33■□□□□ 0.36
CD9-209ENST00000540891 LPCAT2Q7L5N7 544 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 DCAF4L2Q8NA75 395 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 OR7D4Q8NG98 312 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 PTPRN2Q92932 1015 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 TBC1D31Q96DN5 1066 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 ARHGEF26Q96DR7 871 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 PPP1R9BQ96SB3 815 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 RSPH9Q9H1X1 276 aaPredicted RBP17.33■□□□□ 0.36
CD9-209ENST00000540891 FBRSQ9HAH7 460 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 MRPL47Q9HD33 250 aaKnown RBP17.33■□□□□ 0.36
CD9-209ENST00000540891 TMEM248Q9NWD8 314 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 VPS51Q9UID3 782 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 SDK1Q7Z5N4 2213 aa17.33■□□□□ 0.36
CD9-209ENST00000540891 THADAQ6YHU6 1953 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 EDDM13A0A1B0GTR0 161 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 ILVBLA1L0T0 632 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 TARSL2A2RTX5 802 aaKnown RBP17.32■□□□□ 0.36
CD9-209ENST00000540891 MAP3K13O43283 966 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 ATP9BO43861 1147 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 LRCH4O75427 683 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 MT-CO1P00395 513 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 GLDCP23378 1020 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 CD6P30203 668 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 MPLP40238 635 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 DHPSP49366 369 aaPredicted RBP17.32■□□□□ 0.36
CD9-209ENST00000540891 AIF1P55008 147 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 RPL6Q02878 288 aaKnown RBP17.32■□□□□ 0.36
CD9-209ENST00000540891 CREB5Q02930 508 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 CSRP2Q16527 193 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 EFHC2Q5JST6 749 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 SPDYCQ5MJ68 293 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 RWDD4Q6NW29 188 aaKnown RBP17.32■□□□□ 0.36
CD9-209ENST00000540891 SLC36A4Q6YBV0 504 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 ZNF783Q6ZMS7 281 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 ARMCX6Q7L4S7 300 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 SLC41A1Q8IVJ1 513 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 DEFB119Q8N690 84 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 CHP1Q99653 195 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 SMOC1Q9H4F8 434 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 GPATCH2LQ9NWQ4 482 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 WSB2Q9NYS7 404 aaPredicted RBP17.32■□□□□ 0.36
CD9-209ENST00000540891 USP18Q9UMW8 372 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 ZNF292O60281 2723 aa17.32■□□□□ 0.36
CD9-209ENST00000540891 TNRC6BQ9UPQ9 1833 aaKnown RBP17.31■□□□□ 0.36
CD9-209ENST00000540891 SSU72P8A0A1W2PR75 194 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 ZMPSTE24O75844 475 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 CYP1A2P05177 515 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 MIPP30301 263 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 MAPKAPK2P49137 400 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 GALCP54803 685 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 GNA12Q03113 381 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 CA9Q16790 459 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 DAB2IPQ5VWQ8 1189 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 ZNF776Q68DI1 518 aaPredicted RBP17.31■□□□□ 0.36
CD9-209ENST00000540891 SH2D3CQ8N5H7 860 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 GPR161Q8N6U8 529 aaKnown RBP17.31■□□□□ 0.36
CD9-209ENST00000540891 TOE1Q96GM8 510 aaKnown RBP17.31■□□□□ 0.36
CD9-209ENST00000540891 FAM129BQ96TA1 746 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 C2orf49Q9BVC5 232 aaPredicted RBP17.31■□□□□ 0.36
CD9-209ENST00000540891 RETREG1Q9H6L5 497 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 PCSK1NQ9UHG2 260 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 DNAI1Q9UI46 699 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 SLC25A13Q9UJS0 675 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 HS3ST2Q9Y278 367 aa17.31■□□□□ 0.36
CD9-209ENST00000540891 K7ERQ8 282 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 TPM1P09493 284 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 ZNF806P0C7X5 589 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 ACADMP11310 421 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 SRCP12931 536 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 DESP17661 470 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 ACVRL1P37023 503 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 NNMTP40261 264 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 KRT83P78385 493 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 ARF5P84085 180 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 ZBTB16Q05516 673 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 SF3A2Q15428 464 aaKnown RBP17.3■□□□□ 0.36
CD9-209ENST00000540891 DLG2Q15700 870 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 LINGO4Q6UY18 593 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 PRR23CQ6ZRP0 262 aa17.3■□□□□ 0.36
CD9-209ENST00000540891 STK40Q8N2I9 435 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms