RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RPS6KA3P51812 740 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 SH3BGRP55822 239 aaPredicted RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 IRF9Q00978 393 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 SNAPC2Q13487 334 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 OLIG2Q13516 323 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 DPYSQ14117 519 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 BNIPLQ7Z465 357 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 KYQ8NBH2 561 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 KBTBD7Q8WVZ9 684 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 PGLYRP2Q96PD5 576 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 CASS4Q9NQ75 786 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 TMPRSS4Q9NRS4 437 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 KLHL8Q9P2G9 620 aaPredicted RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 CAPN8A6NHC0 703 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 SLC22A2O15244 555 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 TIMM44O43615 452 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 NUDT2P50583 147 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 GTF2A2P52657 109 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 HK2P52789 917 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 TTLL12Q14166 644 aaPredicted RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 TLR1Q15399 786 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 DCAF6Q58WW2 860 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 OTUD1Q5VV17 481 aaPredicted RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 TMC7Q7Z402 723 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 TMEM126BQ8IUX1 230 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 DSELQ8IZU8 1212 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 CPSF7Q8N684 471 aaKnown RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 RP9Q8TA86 221 aaKnown RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 SLC2A14Q8TDB8 520 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 NDRG1Q92597 394 aaKnown RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 CAB39LQ9H9S4 337 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 MID2Q9UJV3 735 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 RAP2CQ9Y3L5 183 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 MAGEB16A2A368 324 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 ASB14A6NK59 587 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 KCNK1O00180 336 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 DCLK1O15075 740 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 HDAC3O15379 428 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 DAB1O75553 588 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 LTFP02788 710 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 APOA4P06727 396 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 CD1EP15812 388 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 PTPN3P26045 913 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 NOS2P35228 1153 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 CSE1LP55060 971 aaKnown RBP12.53□□□□□ -0.4
NPC1-202ENST00000540608 DLG2Q15700 870 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 HSP90AA5PQ58FG0 334 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 SATL1Q86VE3 508 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 TP53INP2Q8IXH6 220 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 FAM149B1Q96BN6 582 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 DCUN1D1Q96GG9 259 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 MCMBPQ9BTE3 642 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 DRC3Q9H069 523 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 C15orf38-AP3S2A0A0A6YYH1 394 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
NPC1-202ENST00000540608 XPO1O14980 1071 aaKnown RBP12.53□□□□□ -0.4
NPC1-202ENST00000540608 USP12O75317 370 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 CAPN15O75808 1086 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 ADSLP30566 484 aaPredicted RBP12.53□□□□□ -0.4
NPC1-202ENST00000540608 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
NPC1-202ENST00000540608 RPL14P50914 215 aaKnown RBP12.53□□□□□ -0.4
NPC1-202ENST00000540608 PPIL2Q13356 520 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 ZFP1Q6P2D0 407 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 ARPINQ7Z6K5 226 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 ZNF410Q86VK4 478 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 SNX32Q86XE0 403 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 DNAAF3Q8N9W5 541 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 RDH11Q8TC12 318 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 DTNBP1Q96EV8 351 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 NPY6RQ99463 290 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 SNX25Q9H3E2 840 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 Q9H521 79 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 WDR55Q9H6Y2 383 aaPredicted RBP12.53□□□□□ -0.4
NPC1-202ENST00000540608 BCAP29Q9UHQ4 241 aa12.53□□□□□ -0.4
NPC1-202ENST00000540608 GOLGA8QA0A0J9YX86 632 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 A0A1B0GVG6 124 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 GOLGA8OA6NCC3 632 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 GOLGA8NF8WBI6 632 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 DNAJA2O60884 412 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 YY1P25490 414 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 HADHAP40939 763 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 ADCYAP1R1P41586 468 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 PRKAA2P54646 552 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.4
NPC1-202ENST00000540608 MPP3Q13368 585 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 CYLC2Q14093 348 aaPredicted RBP12.52□□□□□ -0.4
NPC1-202ENST00000540608 SLC5A9Q2M3M2 681 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 LSM12Q3MHD2 195 aaKnown RBP12.52□□□□□ -0.4
NPC1-202ENST00000540608 PIGGQ5H8A4 983 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 MARCH8Q5T0T0 291 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 SEL1L3Q68CR1 1132 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 KCTD11Q693B1 232 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms