RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 DUSP16Q9BY84 665 aa9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 BTBD1Q9H0C5 482 aa9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 VPS16Q9H269 839 aa9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 MARK1Q9P0L2 795 aa9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 LIMA1Q9UHB6 759 aaKnown RBP9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 CHORDC1Q9UHD1 332 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 PCDHB4Q9Y5E5 795 aa9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 ITPR2Q14571 2701 aa9.22□□□□□ -0.93
TRAPPC1-202ENST00000540486 BECN2A8MW95 431 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 NEDD8-MDP1E9PL57 170 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 SEMA4FO95754 770 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 CISD3P0C7P0 127 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 VDRP11473 427 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 ATP1A3P13637 1013 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 EPHA8P29322 1005 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 RXRGP48443 463 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 PGFP49763 221 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 ZNF165P49910 485 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 COPB1P53618 953 aaKnown RBP9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 TAF10Q12962 218 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 ZSCAN23Q3MJ62 389 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 SFMBT2Q5VUG0 894 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 CDCP2Q5VXM1 449 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 GPRIN1Q7Z2K8 1008 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 KANSL1Q7Z3B3 1105 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 OXR1Q8N573 874 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 ANKRD52Q8NB46 1076 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 UCMAQ8WVF2 138 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 JAKMIP2Q96AA8 810 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 GRAMD1AQ96CP6 724 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 SMARCD1Q96GM5 515 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 SLC46A1Q96NT5 459 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 ORAI3Q9BRQ5 295 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 BBS2Q9BXC9 721 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 SLC25A18Q9H1K4 315 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 DMAP1Q9NPF5 467 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 ACP6Q9NPH0 428 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 GDF3Q9NR23 364 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 KRT82Q9NSB4 513 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 FBXO10Q9UK96 956 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 DNAJC12Q9UKB3 198 aa9.21□□□□□ -0.94
TRAPPC1-202ENST00000540486 TMEM131Q92545 1883 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 FAM92AA1XBS5 289 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 SMTNL1A8MU46 457 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 TULP2O00295 520 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 O00370 1275 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 FOXN3O00409 490 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 FSBPO95073 299 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 GJB6O95452 261 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 PAEPP09466 180 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 FAM200BP0CF97 657 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 POU3F2P20265 443 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 YWHAQP27348 245 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 KLK7P49862 253 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 SLC5A3P53794 718 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 MFAP3P55082 362 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 YWHAEP62258 255 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 CNGA2Q16280 664 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 ARHGAP44Q17R89 818 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 KLHDC7AQ5VTJ3 777 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 USP53Q70EK8 1073 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 HTR3DQ70Z44 454 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 RBBP8NLQ8NC74 664 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 PDZD8Q8NEN9 1154 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 UBA3Q8TBC4 463 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 OVCA2Q8WZ82 227 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 EXTL1Q92935 676 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 SGF29Q96ES7 293 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 NAA15Q9BXJ9 866 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 NAT10Q9H0A0 1025 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 LHX5Q9H2C1 402 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 ERVMER34-1Q9H9K5 563 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 SGK2Q9HBY8 427 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 APEX2Q9UBZ4 518 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 PLEKHB1Q9UF11 243 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 TSPAN16Q9UKR8 245 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 KIAA1257Q9ULG3 409 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 SLC27A6Q9Y2P4 619 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 NBASA2RRP1 2371 aa9.2□□□□□ -0.94
TRAPPC1-202ENST00000540486 ITPR3Q14573 2671 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 A0A1W2PPC4 97 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 PES1O00541 588 aaKnown RBP9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 TEX33O43247 280 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 COCHO43405 550 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 RTN3O95197 1032 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 ZDHHC11BP0C7U3 371 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 CD19P15391 556 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 BRD2P25440 801 aaKnown RBP9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 ELAVL4P26378 380 aaKnown RBP9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 CD38P28907 300 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 TUBP50607 506 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 KIF11P52732 1056 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 ZBTB16Q05516 673 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 PDE4CQ08493 712 aa9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 IFRD2Q12894 506 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC1-202ENST00000540486 BNIP3Q12983 259 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms