RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 FAM149AA5PLN7 773 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 SIGLEC16A6NMB1 481 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 FAM72CH0Y354 149 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 GJB3O75712 270 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 CNTN5O94779 1100 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 KRT3P12035 628 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 CCR1P32246 355 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 HOXD12P35452 270 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 HDAC4P56524 1084 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 DEUP1Q05D60 604 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 MAMLD1Q13495 774 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 AUHQ13825 339 aaKnown RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 HNRNPDQ14103 355 aaKnown RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 DUOXA1Q1HG43 343 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 FAM72AQ5TYM5 149 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 LYSMD4Q5XG99 296 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 SPECC1LQ69YQ0 1117 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 FAM72DQ6L9T8 149 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 ARCQ7LC44 396 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 FAM72BQ86X60 149 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 FAM131BQ86XD5 332 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 CCDC185Q8N715 623 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 C3orf20Q8ND61 904 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 SYN2Q92777 582 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 BTN2A3PQ96KV6 586 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 SIK2Q9H0K1 926 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 ISCUQ9H1K1 167 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 PRORYQ9H606 182 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 CLMPQ9H6B4 373 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 POLMQ9NP87 494 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 ABCB8Q9NUT2 735 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 DNAAF2Q9NVR5 837 aaKnown RBP11.77□□□□□ -0.53
TMEM258-205ENST00000540434 DKK4Q9UBT3 224 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 VANGL2Q9ULK5 521 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 STARD13Q9Y3M8 1113 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 RAD54BQ9Y620 910 aa11.77□□□□□ -0.53
TMEM258-205ENST00000540434 A0A1W2PQF6 199 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CCP110O43303 1012 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 APOEP02649 317 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 SERPING1P05155 500 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CALB1P05937 261 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 SERPINF2P08697 491 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 GZMAP12544 262 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 EIF4A3P38919 411 aaKnown RBP11.76□□□□□ -0.53
TMEM258-205ENST00000540434 DPP6P42658 865 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CTSOP43234 321 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-205ENST00000540434 SNX16P57768 344 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 MRPS21P82921 87 aaKnown RBP11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CFHR1Q03591 330 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 GFPT1Q06210 699 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-205ENST00000540434 SRSF1Q07955 248 aaKnown RBP eCLIP11.76□□□□□ -0.53
TMEM258-205ENST00000540434 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 ALFQ53S48 1182 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 PLEKHA7Q6IQ23 1121 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CHSY1Q86X52 802 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CPNE8Q86YQ8 564 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 NAXDQ8IW45 347 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 APCDD1Q8J025 514 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CARNMT1Q8N4J0 409 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 ZNF513Q8N8E2 541 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CCDC26Q8TAB7 109 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CEP76Q8TAP6 659 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 CYB5D2Q8WUJ1 264 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 RNF34Q969K3 372 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 ARHGEF26Q96DR7 871 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 MCEEQ96PE7 176 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 DNAJC7Q99615 494 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 TRIM62Q9BVG3 475 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 SLC6A17Q9H1V8 727 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 MTG2Q9H4K7 406 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 MUC22E2RYF6 1773 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-205ENST00000540434 KNTC1P50748 2209 aa11.76□□□□□ -0.53
TMEM258-205ENST00000540434 MGAQ8IWI9 3026 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 SPTA1P02549 2419 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.75□□□□□ -0.53
TMEM258-205ENST00000540434 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 CBFA2T2O43439 604 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 RTN2O75298 545 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 CYBBP04839 570 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 CCDC172P0C7W6 258 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 TCF4P15884 667 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 GPD1P21695 349 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 MZF1P28698 734 aaPredicted RBP11.75□□□□□ -0.53
TMEM258-205ENST00000540434 IL12RB1P42701 662 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 PTPN9P43378 593 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 ZNF75DP51815 510 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 PTPRNQ16849 979 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 FUT11Q495W5 492 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 C5orf22Q49AR2 442 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
TMEM258-205ENST00000540434 CXorf57Q6NSI4 855 aaKnown RBP11.75□□□□□ -0.53
TMEM258-205ENST00000540434 DNAJC24Q6P3W2 148 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 CHST9Q7L1S5 443 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 TMPRSS7Q7RTY8 843 aa11.75□□□□□ -0.53
TMEM258-205ENST00000540434 TMC6Q7Z403 805 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms