RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 PCDH9Q9HC56 1237 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 PNPLA8Q9NP80 782 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 DDX18Q9NVP1 670 aaKnown RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 A0A087WXM4 84 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 LOC100506127A0A0U1RQW1 187 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 MTTPP55157 894 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 GALNT3Q14435 633 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 TXNDC11Q6PKC3 985 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 KCNMB4Q86W47 210 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 LRRC17Q8N6Y2 441 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 AIFM2Q9BRQ8 373 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 PLA2G12BQ9BX93 195 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 MID1IP1Q9NPA3 183 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 LYVE1Q9Y5Y7 322 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 CES2O00748 559 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 CCR1P32246 355 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 CDH17Q12864 832 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 SGCGQ13326 291 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 FRG1Q14331 258 aaKnown RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 RNF19BQ6ZMZ0 732 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 TBC1D24Q9ULP9 559 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 ENTPD4Q9Y227 616 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 IRAK3Q9Y616 596 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 WRBO00258 174 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 ZNF7P17097 686 aaPredicted RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 PYDC2Q56P42 97 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 RIBC2Q9H4K1 309 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 FBXO44Q9H4M3 255 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 UBP1Q9NZI7 540 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 ZNF232Q9UNY5 417 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 SHOC2Q9UQ13 582 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 TMCC2O75069 709 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 ORC1Q13415 861 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 SPANXN3Q5MJ09 141 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 CLVS1Q8IUQ0 354 aaPredicted RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 REEP1Q9H902 201 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 DPP7Q9UHL4 492 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 G3V2T6 193 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 PRG2P13727 222 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 NPY2RP49146 381 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 CDC42EP5Q6NZY7 148 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 RBM43Q6ZSC3 357 aaKnown RBP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 FAM131BQ86XD5 332 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 RBM22Q9NW64 420 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNB4-210ENST00000539935 CIDEBQ9UHD4 219 aa13.03□□□□□ -0.32
CACNB4-210ENST00000539935 SLC12A8A0AV02 714 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 RGS14O43566 566 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 WEE1P30291 646 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 SLC47A2Q86VL8 602 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.32
CACNB4-210ENST00000539935 OSBPL11Q9BXB4 747 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 INVSQ9Y283 1065 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 TDRKHQ9Y2W6 561 aaKnown RBP13.02□□□□□ -0.32
CACNB4-210ENST00000539935 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 STXBP1P61764 594 aaKnown RBP13.02□□□□□ -0.32
CACNB4-210ENST00000539935 NFE2Q16621 373 aaPredicted RBP13.02□□□□□ -0.32
CACNB4-210ENST00000539935 FAM171BQ6P995 826 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 TMEM176AQ96HP8 235 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 TMEM237Q96Q45 408 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 CYP3A43Q9HB55 503 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 RASSF1Q9NS23 344 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 CCDC167Q9P0B6 97 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 ZNF70Q9UC06 446 aaPredicted RBP13.02□□□□□ -0.32
CACNB4-210ENST00000539935 ME2P23368 584 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 PIK3CGP48736 1102 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 NFIAQ12857 509 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.32
CACNB4-210ENST00000539935 VPS72Q15906 364 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 PCNX4Q63HM2 1172 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 DHRSXQ8N5I4 330 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 MAGEC3Q8TD91 643 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 ZC3H10Q96K80 434 aaKnown RBP13.02□□□□□ -0.32
CACNB4-210ENST00000539935 TMEM168Q9H0V1 697 aa13.02□□□□□ -0.32
CACNB4-210ENST00000539935 PLOD2O00469 737 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 MAFKO60675 156 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 USP49Q70CQ1 688 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 CLEC10AQ8IUN9 316 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 METTL6Q8TCB7 284 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 FAM151AQ8WW52 585 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 TEKT5Q96M29 485 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 RUSC1Q9BVN2 902 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 OR56A5P0C7T3 313 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 CAV3P56539 151 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 PSME3P61289 254 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 ZNF621Q6ZSS3 439 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 NYAP1Q6ZVC0 841 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 FBXO25Q8TCJ0 367 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
CACNB4-210ENST00000539935 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms