RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CALCOCO2Q13137 446 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 COL19A1Q14993 1142 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 FAM182AQ5T1J6 154 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 TIGD7Q6NT04 549 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 SETD3Q86TU7 594 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 GSPT2Q8IYD1 628 aaKnown RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 CCDC110Q8TBZ0 833 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 LRRC45Q96CN5 670 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 MSLNLQ96KJ4 702 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 TSGA13Q96PP4 275 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 MAGEH1Q9H213 219 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 PAK5Q9P286 719 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 NFU1Q9UMS0 254 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 WNT6Q9Y6F9 365 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 C5orf60A6NFR6 353 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 KCNK1O00180 336 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 SLC9A3R1O14745 358 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 MAFKO60675 156 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 GCATO75600 419 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 LUC7L3O95232 432 aaKnown RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 IVDP26440 423 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 CLCN6P51797 869 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 GNA12Q03113 381 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 BRD3Q15059 726 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 IZUMO3Q5VZ72 239 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 CCDC117Q8IWD4 279 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 OTUB2Q96DC9 234 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 RSPRY1Q96DX4 576 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 CEP41Q9BYV8 373 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 ARGLU1Q9NWB6 273 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 GRHL1Q9NZI5 618 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 WHRNQ9P202 907 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 IPO11Q9UI26 975 aaKnown RBP16.54■□□□□ 0.24
TRAF3-204ENST00000539721 TBC1D30Q9Y2I9 924 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 DOCK8Q8NF50 2099 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 A0A0A0MRY4 1105 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ILVBLA1L0T0 632 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 DNALI1O14645 258 aaPredicted RBP16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ERLIN1O75477 346 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 SEC31AO94979 1220 aaKnown RBP16.53■□□□□ 0.24
TRAF3-204ENST00000539721 MYBL2P10244 700 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ITIH2P19823 946 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ACVRL1P37023 503 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 WASHC5Q12768 1159 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 CDH18Q13634 790 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ANKRD20A2Q5SQ80 823 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 MPP7Q5T2T1 576 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ANKRD20A1Q5TYW2 823 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ANKRD20A3Q5VUR7 823 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ARHGEF18Q6ZSZ5 1173 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 MFN1Q8IWA4 741 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 TAB3Q8N5C8 712 aaPredicted RBP16.53■□□□□ 0.24
TRAF3-204ENST00000539721 BBOF1Q8ND07 529 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 OR52K2Q8NGK3 314 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 BPIFB1Q8TDL5 484 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 ARHGEF2Q92974 986 aaKnown RBP16.53■□□□□ 0.24
TRAF3-204ENST00000539721 SPATA13Q96N96 652 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 MYADMQ96S97 322 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 LINC00597Q9H2U6 94 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 SP110Q9HB58 689 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 TRPV4Q9HBA0 871 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 PLK2Q9NYY3 685 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 REV3LO60673 3130 aa16.53■□□□□ 0.24
TRAF3-204ENST00000539721 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.52■□□□□ 0.24
TRAF3-204ENST00000539721 MATN3O15232 486 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 PTPN3P26045 913 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
TRAF3-204ENST00000539721 IFNAR2P48551 515 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 PLTPP55058 493 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 SERINC3Q13530 473 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 FYB2Q5VWT5 728 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 RNF219Q5W0B1 726 aaPredicted RBP16.52■□□□□ 0.24
TRAF3-204ENST00000539721 IL31Q6EBC2 164 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 CXorf57Q6NSI4 855 aaKnown RBP16.52■□□□□ 0.24
TRAF3-204ENST00000539721 C4orf22Q6V702 233 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 EIF1ADQ8N9N8 165 aaKnown RBP16.52■□□□□ 0.24
TRAF3-204ENST00000539721 OR7D4Q8NG98 312 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 MUC3BQ9H195 1237 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 POMKQ9H5K3 350 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 SPHK2Q9NRA0 654 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 DUS2Q9NX74 493 aaKnown RBP16.52■□□□□ 0.24
TRAF3-204ENST00000539721 OBP2AQ9NY56 170 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 KLHL8Q9P2G9 620 aaPredicted RBP16.52■□□□□ 0.24
TRAF3-204ENST00000539721 CD207Q9UJ71 328 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 ANAPC5Q9UJX4 755 aa16.52■□□□□ 0.24
TRAF3-204ENST00000539721 A0A0D9SEW6 157 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 CCDC151A5D8V7 595 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 HEPACAM2A8MVW5 462 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 NDC80O14777 642 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 H2AFXP16104 143 aaPredicted RBP16.51■□□□□ 0.23
TRAF3-204ENST00000539721 FCARP24071 287 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ITGA8P53708 1063 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 BASP1P80723 227 aaKnown RBP16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ZBTB17Q13105 803 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ANO4Q32M45 955 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 MAP9Q49MG5 647 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ZDHHC24Q6UX98 284 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms